Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   ANG_RS02965 Genome accession   NZ_AP013072
Coordinates   579682..581661 (+) Length   659 a.a.
NCBI ID   WP_025271648.1    Uniprot ID   -
Organism   Streptococcus anginosus subsp. whileyi MAS624     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 574682..586661
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ANG_RS02950 (ANG_0592) - 574818..576428 (+) 1611 WP_025271646.1 CTP synthase -
  ANG_RS02955 (ANG_0593) - 576662..577345 (+) 684 WP_025271647.1 B3/4 domain-containing protein -
  ANG_RS02960 (ANG_0594) amiA3 577510..579486 (+) 1977 WP_003035484.1 peptide ABC transporter substrate-binding protein Regulator
  ANG_RS02965 (ANG_0595) amiA3 579682..581661 (+) 1980 WP_025271648.1 peptide ABC transporter substrate-binding protein Regulator
  ANG_RS02970 (ANG_0596) amiC 582038..583534 (+) 1497 WP_003035572.1 ABC transporter permease Regulator
  ANG_RS02975 (ANG_0597) amiD 583534..584460 (+) 927 WP_003035531.1 oligopeptide ABC transporter permease OppC Regulator
  ANG_RS02980 (ANG_0598) amiE 584469..585536 (+) 1068 WP_020999798.1 ABC transporter ATP-binding protein Regulator
  ANG_RS02985 (ANG_0599) amiF 585547..586470 (+) 924 WP_003031730.1 ATP-binding cassette domain-containing protein Regulator

Sequence

Protein


Download         Length: 659 a.a.        Molecular weight: 73278.87 Da        Isoelectric Point: 7.8685

>NTDB_id=65507 ANG_RS02965 WP_025271648.1 579682..581661(+) (amiA3) [Streptococcus anginosus subsp. whileyi MAS624]
MKKSKIITLAALALLATGALAACSSSKTSSGNKTFSYIYEQDPDNLNYLTTGKAATANLTSNVIDGLLENDRYGNLVPSV
AKDWTVSKDGLTYTYTLRKGVKWYTSEGEEYAEVKAQDFVTGLKYATDNKSDAIYLVQDSVKGLDAYMKGENKDFSSVGI
KAVDDYTVQYTLNRPESFWNSKTTMGVLAPVNAEFLKSKGNKFAQATDPSSLLYNGPYLLKSITAKSSVEFAKNPNYWDK
KNVHIDNIKLSYYDGQDQDKLAKGFSDGSFTNAKVFPTSPSYASVSKKYKNNIVYTPQDATTYLVATNIDRQSYNHTSKT
TDAQKTSTKKALLNKDFRQAITFAFDRTAYASQVNGKDGATKMLRNLFVPPTFVQTDDKSFVELVKEKLIGYDESWKDVN
LNDAQDGLYNPTKAKEKLAKAKAALQADGVQFPIHIDMPVDQTATNKVQRVQSLKQSIEKNLGKENVVIDIQQMSKDDVN
NITYFAESAAAEDWDLSDNVGWSPDFQDPSTYLDVIKPSSGESTKTYLGFDAGTNNAAAAQVGMNEYEKLLNEAEKETNN
TNARYEKYAAAQAWLTDNALVIPTTTLTGRPILSRTVPFSNAFAWSGNKGNSETILYKYLEIQDEPVTQNQYKKAMEKWN
KKRTESNKKAQEELANHVK

Nucleotide


Download         Length: 1980 bp        

>NTDB_id=65507 ANG_RS02965 WP_025271648.1 579682..581661(+) (amiA3) [Streptococcus anginosus subsp. whileyi MAS624]
ATGAAGAAAAGTAAAATCATTACCCTTGCAGCGCTAGCCTTGCTTGCAACAGGAGCTCTAGCAGCTTGTTCTAGCTCTAA
AACAAGCTCGGGGAACAAAACATTCTCATATATTTATGAGCAAGATCCAGATAACCTGAACTATTTGACAACTGGGAAAG
CAGCTACTGCAAATCTTACCAGTAATGTCATTGACGGACTCTTGGAAAATGACCGTTACGGAAATCTAGTTCCTTCTGTA
GCGAAGGATTGGACAGTCTCCAAGGATGGCTTGACTTATACTTATACACTTCGTAAGGGTGTGAAATGGTACACATCAGA
GGGTGAAGAGTATGCAGAAGTTAAGGCACAAGACTTTGTGACAGGCTTAAAATATGCTACGGATAATAAATCTGATGCTA
TTTACTTGGTGCAAGATTCTGTTAAAGGCTTGGATGCTTACATGAAGGGTGAAAATAAAGATTTCTCTTCTGTCGGTATC
AAAGCAGTTGATGATTACACGGTTCAATACACGCTTAATCGACCAGAAAGCTTTTGGAATTCTAAAACAACAATGGGCGT
TCTAGCACCAGTTAATGCAGAATTTTTGAAATCAAAAGGCAATAAATTTGCACAAGCAACAGACCCATCTAGTCTTCTTT
ATAATGGTCCATACTTGCTGAAATCTATCACAGCGAAATCGTCTGTTGAATTTGCTAAAAATCCAAACTACTGGGATAAG
AAAAATGTGCACATTGACAACATCAAGCTGTCTTACTATGATGGTCAAGACCAAGACAAACTTGCTAAAGGATTTAGTGA
TGGCTCATTTACCAATGCTAAAGTATTTCCAACTAGCCCAAGTTATGCTTCTGTCAGCAAGAAATACAAAAACAACATCG
TTTATACTCCACAAGATGCAACAACTTACTTAGTAGCTACAAATATTGATCGTCAATCTTACAATCACACTTCAAAGACA
ACAGATGCTCAAAAAACTTCTACTAAGAAAGCTTTGCTAAACAAGGATTTCCGTCAAGCGATTACCTTTGCATTTGACCG
CACTGCTTATGCATCACAGGTGAATGGTAAAGACGGTGCGACGAAGATGCTCCGTAATCTCTTTGTACCACCAACGTTTG
TTCAAACAGATGACAAGAGCTTTGTAGAATTGGTCAAAGAAAAATTGATTGGCTACGATGAAAGTTGGAAAGATGTCAAC
TTAAATGATGCGCAAGATGGGCTTTATAATCCAACTAAAGCTAAAGAAAAATTAGCGAAAGCGAAAGCAGCGCTTCAAGC
AGATGGCGTTCAATTCCCAATCCACATTGATATGCCAGTTGACCAAACAGCAACTAATAAAGTTCAACGTGTGCAATCAT
TGAAACAATCTATTGAAAAAAATCTTGGGAAAGAAAATGTTGTGATTGATATTCAACAAATGTCTAAAGACGACGTGAAT
AATATCACTTACTTTGCCGAATCCGCAGCGGCAGAAGATTGGGATCTTTCTGATAATGTTGGTTGGAGTCCAGACTTCCA
AGACCCATCTACCTATCTTGATGTTATCAAACCTTCAAGCGGTGAAAGCACTAAGACCTATCTAGGATTTGATGCAGGCA
CGAACAACGCTGCTGCAGCACAAGTTGGTATGAACGAATATGAAAAGTTGTTGAATGAGGCTGAAAAAGAAACCAACAAT
ACGAATGCACGCTATGAAAAATATGCTGCAGCCCAAGCTTGGTTGACTGATAATGCATTGGTCATTCCAACAACAACACT
AACGGGTCGCCCAATTCTTTCTCGTACAGTACCATTTAGTAATGCCTTTGCTTGGTCAGGAAACAAGGGAAATAGTGAAA
CAATTCTCTATAAATACCTTGAAATCCAAGATGAGCCTGTGACTCAAAATCAATACAAGAAGGCAATGGAAAAATGGAAT
AAAAAGCGCACAGAGTCTAATAAAAAGGCTCAAGAAGAACTTGCAAATCATGTTAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(76-520)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

60.758

100

0.609
  amiA3 Streptococcus thermophilus LMG 18311

60.152

100

0.602
  amiA Streptococcus salivarius strain HSISS4

59.697

100

0.598

Multiple sequence alignment