Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   ANG_RS02980 Genome accession   NZ_AP013072
Coordinates   584469..585536 (+) Length   355 a.a.
NCBI ID   WP_020999798.1    Uniprot ID   -
Organism   Streptococcus anginosus subsp. whileyi MAS624     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 579469..590536
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ANG_RS02965 (ANG_0595) amiA3 579682..581661 (+) 1980 WP_025271648.1 peptide ABC transporter substrate-binding protein Regulator
  ANG_RS02970 (ANG_0596) amiC 582038..583534 (+) 1497 WP_003035572.1 ABC transporter permease Regulator
  ANG_RS02975 (ANG_0597) amiD 583534..584460 (+) 927 WP_003035531.1 oligopeptide ABC transporter permease OppC Regulator
  ANG_RS02980 (ANG_0598) amiE 584469..585536 (+) 1068 WP_020999798.1 ABC transporter ATP-binding protein Regulator
  ANG_RS02985 (ANG_0599) amiF 585547..586470 (+) 924 WP_003031730.1 ATP-binding cassette domain-containing protein Regulator
  ANG_RS02990 - 586656..587480 (+) 825 Protein_577 Cof-type HAD-IIB family hydrolase -
  ANG_RS02995 (ANG_0602) - 587553..588518 (-) 966 WP_003035453.1 LacI family DNA-binding transcriptional regulator -
  ANG_RS03000 (ANG_0603) - 588499..589956 (-) 1458 WP_025271649.1 sucrose-6-phosphate hydrolase -

Sequence


Protein


Download         Length: 355 a.a.        Molecular weight: 39693.38 Da        Isoelectric Point: 4.6920

>NTDB_id=65510 ANG_RS02980 WP_020999798.1 584469..585536(+) (amiE) [Streptococcus anginosus subsp. whileyi MAS624]
MTQEKNVILTARDIVVEFDVRDKVLTAIRGVSLDLIEGEVLALVGESGSGKSVLTKTFTGMLEENGRVAQGTIDYRGQDL
TKLKSNKDWEPIRGVKIATIFQDPMTSLDPINTIGSQITEVIIKHQKKTPKEAKEMAVDYMNKVGIPDAEKRFNEYPFQY
SGGMRQRIVIAIALACRPDILICDEPTTALDVTIQAQIIDLLKSLQQEYEFTTIFITHDLGVVASIADKVAVMYAGEIVE
YGTVEEVFYDPRHPYTWSLLSSLPQLADDKGELYSIPGTPPSLYSHLQGDAFALRSDYAMEIDFEEKPPQIYVTDTHWAK
TWLLHENAPKVNKPAVIDDLHEKISSKMGFAHLDA

Nucleotide


Download         Length: 1068 bp        

>NTDB_id=65510 ANG_RS02980 WP_020999798.1 584469..585536(+) (amiE) [Streptococcus anginosus subsp. whileyi MAS624]
ATGACACAAGAAAAAAATGTAATATTGACTGCTCGCGATATTGTCGTGGAATTTGACGTTCGTGATAAAGTCTTAACAGC
CATTCGTGGTGTTTCGCTTGACCTTATCGAAGGTGAGGTTCTTGCACTTGTAGGAGAATCTGGTTCTGGTAAGTCTGTTT
TGACAAAGACATTTACAGGAATGTTAGAGGAAAATGGTCGAGTTGCTCAAGGAACGATTGATTACCGTGGACAAGATTTG
ACAAAATTGAAGTCTAATAAAGATTGGGAACCTATACGCGGTGTTAAAATTGCAACAATCTTCCAAGATCCGATGACGAG
TTTGGATCCTATTAACACAATTGGTAGCCAAATTACAGAAGTGATTATCAAGCATCAAAAGAAAACGCCAAAAGAAGCAA
AAGAAATGGCTGTTGACTATATGAATAAGGTCGGCATTCCTGATGCTGAAAAGCGTTTTAATGAATACCCATTCCAATAT
TCAGGAGGAATGCGTCAACGGATTGTTATCGCTATTGCGCTTGCTTGTCGCCCTGATATCCTTATCTGTGATGAACCAAC
GACAGCGCTTGACGTTACGATTCAGGCACAAATCATTGATTTGTTGAAATCTTTGCAGCAAGAATATGAATTTACAACTA
TTTTTATCACCCACGACCTGGGAGTGGTAGCAAGTATTGCAGATAAGGTTGCGGTTATGTATGCTGGTGAAATCGTTGAA
TACGGAACAGTAGAAGAAGTCTTTTACGATCCACGTCATCCTTACACTTGGAGTTTGTTATCTAGTCTGCCTCAGTTGGC
AGATGATAAGGGTGAGTTGTATTCAATTCCTGGAACGCCGCCATCTCTTTATTCACATTTACAAGGAGATGCATTTGCCT
TGCGTTCAGATTATGCTATGGAAATTGATTTTGAAGAGAAGCCACCTCAAATATATGTAACGGATACCCACTGGGCAAAA
ACATGGTTGTTACATGAGAATGCTCCAAAAGTGAATAAGCCAGCTGTTATTGATGATTTACACGAAAAAATTAGCTCAAA
AATGGGCTTTGCCCATTTAGACGCCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

86.119

99.437

0.856

  amiE Streptococcus thermophilus LMG 18311

84.703

99.437

0.842

  amiE Streptococcus thermophilus LMD-9

84.703

99.437

0.842

  oppD Streptococcus mutans UA159

56.215

99.718

0.561


Multiple sequence alignment