Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   ANG_RS02960 Genome accession   NZ_AP013072
Coordinates   577510..579486 (+) Length   658 a.a.
NCBI ID   WP_003035484.1    Uniprot ID   I0SFH2
Organism   Streptococcus anginosus subsp. whileyi MAS624     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 572510..584486
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ANG_RS02940 (ANG_0590) tig 572527..573810 (+) 1284 WP_025271645.1 trigger factor -
  ANG_RS02945 (ANG_0591) rpoE 574048..574635 (+) 588 WP_003035581.1 DNA-directed RNA polymerase subunit delta -
  ANG_RS02950 (ANG_0592) - 574818..576428 (+) 1611 WP_025271646.1 CTP synthase -
  ANG_RS02955 (ANG_0593) - 576662..577345 (+) 684 WP_025271647.1 B3/4 domain-containing protein -
  ANG_RS02960 (ANG_0594) amiA3 577510..579486 (+) 1977 WP_003035484.1 peptide ABC transporter substrate-binding protein Regulator
  ANG_RS02965 (ANG_0595) amiA3 579682..581661 (+) 1980 WP_025271648.1 peptide ABC transporter substrate-binding protein Regulator
  ANG_RS02970 (ANG_0596) amiC 582038..583534 (+) 1497 WP_003035572.1 ABC transporter permease Regulator
  ANG_RS02975 (ANG_0597) amiD 583534..584460 (+) 927 WP_003035531.1 oligopeptide ABC transporter permease OppC Regulator

Sequence

Protein


Download         Length: 658 a.a.        Molecular weight: 72384.91 Da        Isoelectric Point: 8.5876

>NTDB_id=65506 ANG_RS02960 WP_003035484.1 577510..579486(+) (amiA3) [Streptococcus anginosus subsp. whileyi MAS624]
MKKSKIIAVAGVALLTAGFLTACSGSKSNSAETKFGYVYSGDPETLDYVTSGKATTSDLVTNGVDGLLENDKYGNLVPSM
AKSWTVSKDGLTYTYKLRKGAKWYTSEGEEYAEVKAQDFVTGLKHAADKKSEALYLVQNSIKGLDAYVNGQTKDFSTVGV
KAVDDYTVQYTLNKPEPYWNSKTTSAIMWPINAEFLKSKGNKFGQSTDPNSILYNGPFLMKAITAKSAVEYVKNKHYWDK
DKVKVDSIKLAYYDGQDQDSLARNFKDGAYSYARLFPTSSNFATFEKQFKDNIYTAEAGSGTAALALNIDRQSYNHTAKK
TDEEKNSTKKALLNKDFRQALNFALDRESYAAQVNGKDGAATAIRNMFVPSNFVQVGEKSFSDVVEEKLASYGDDWKGVK
LADSQNGLYNPTKAKAKFAKAKEALQAQGVKFPIHLDVPTVETSKNYVARMQSLKQSVEKVLGKENVVMDLNMMSEDDFN
NVTYYAPNAAGEDWDISGAVGWSPDYQDPSTYLDILKSTSSDNTKTWFGFDSGSENAGAKAVGLDEYNKLVDEAGAETTD
IAKRYEKYAAAQAWLTDSSLVLPTMASTGAGTFVSRLQPFSGAFAQTGSKGSSTYYKYIKVGKDAVTKKDYEAAKKKWQK
EKVESNKKAQDELADHVK

Nucleotide


Download         Length: 1977 bp        

>NTDB_id=65506 ANG_RS02960 WP_003035484.1 577510..579486(+) (amiA3) [Streptococcus anginosus subsp. whileyi MAS624]
ATGAAAAAAAGTAAAATTATTGCAGTAGCAGGGGTAGCCCTACTAACTGCTGGTTTTTTAACAGCTTGCTCGGGTTCGAA
ATCAAACTCGGCTGAAACAAAATTTGGTTATGTGTATTCTGGTGATCCAGAAACTTTGGATTATGTAACGTCAGGAAAAG
CAACCACTAGCGATCTTGTGACAAATGGAGTTGACGGATTGTTAGAAAATGACAAATATGGAAATCTTGTACCATCAATG
GCTAAGTCATGGACTGTATCAAAAGATGGTTTAACCTATACTTATAAACTTCGTAAGGGTGCCAAATGGTACACATCAGA
AGGGGAAGAATACGCAGAAGTTAAAGCGCAAGACTTTGTAACTGGTTTGAAACATGCTGCCGATAAAAAATCTGAGGCGC
TTTATTTGGTTCAAAACTCAATTAAAGGTTTAGATGCTTACGTGAATGGTCAAACAAAAGACTTTTCAACGGTAGGTGTG
AAAGCAGTTGATGATTATACTGTTCAGTATACATTGAACAAGCCAGAACCATATTGGAATTCTAAGACAACCTCTGCCAT
TATGTGGCCAATCAATGCCGAATTTTTGAAATCTAAAGGAAATAAATTTGGTCAATCAACAGACCCTAACTCAATCCTTT
ATAATGGACCATTCTTGATGAAAGCTATCACAGCAAAATCTGCGGTAGAATATGTGAAAAACAAACATTATTGGGATAAA
GATAAAGTAAAAGTTGATAGCATTAAACTTGCTTACTATGATGGTCAAGACCAAGACTCATTGGCTCGTAATTTCAAAGA
TGGGGCATACTCATACGCACGCCTCTTCCCAACAAGTTCAAACTTTGCAACTTTTGAAAAACAATTCAAGGACAATATCT
ATACAGCAGAAGCAGGCTCTGGAACGGCTGCTTTAGCCCTTAATATTGACCGTCAATCTTACAACCATACGGCTAAGAAA
ACAGATGAAGAAAAAAATTCAACGAAAAAGGCATTGTTGAACAAAGACTTCCGTCAAGCTTTGAACTTTGCACTTGACCG
CGAATCTTATGCAGCACAAGTAAATGGTAAAGATGGTGCTGCCACAGCAATCCGTAACATGTTTGTACCATCAAATTTTG
TTCAAGTTGGTGAAAAATCATTTAGTGATGTTGTAGAAGAAAAATTAGCAAGCTATGGCGATGACTGGAAGGGTGTCAAA
CTAGCTGATTCACAAAATGGCTTGTACAATCCAACAAAAGCAAAAGCAAAATTTGCAAAAGCAAAAGAAGCTTTGCAAGC
TCAAGGTGTGAAATTCCCAATCCATTTAGATGTTCCTACTGTAGAAACTTCTAAGAACTATGTTGCTCGTATGCAATCTT
TGAAACAGTCTGTTGAAAAAGTACTTGGTAAAGAAAATGTTGTCATGGACTTGAACATGATGTCAGAAGATGACTTTAAC
AACGTCACTTACTATGCTCCAAATGCAGCTGGCGAAGATTGGGATATCTCAGGCGCTGTTGGTTGGAGTCCCGACTATCA
AGATCCATCTACTTATCTTGACATTTTGAAATCAACATCTTCTGATAATACGAAAACTTGGTTTGGATTTGACTCTGGTA
GTGAAAATGCTGGTGCTAAAGCAGTTGGCTTGGACGAATATAATAAATTAGTCGATGAAGCAGGTGCAGAAACAACAGAC
ATTGCAAAACGTTATGAAAAATATGCAGCAGCACAAGCTTGGTTAACAGACAGTTCACTTGTCTTACCAACAATGGCTTC
AACTGGTGCAGGAACATTTGTGTCACGTCTTCAACCATTCTCAGGTGCGTTTGCACAAACAGGTAGCAAAGGTAGCTCAA
CCTACTATAAATACATTAAAGTCGGTAAAGATGCTGTTACGAAGAAAGACTATGAAGCAGCTAAGAAGAAATGGCAAAAA
GAAAAAGTTGAATCTAACAAAAAAGCTCAAGACGAATTAGCTGATCATGTAAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(76-522)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I0SFH2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

64.188

100

0.643
  amiA3 Streptococcus thermophilus LMG 18311

64.036

100

0.641
  amiA Streptococcus salivarius strain HSISS4

63.07

100

0.631

Multiple sequence alignment