Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiC   Type   Regulator
Locus tag   ANG_RS02970 Genome accession   NZ_AP013072
Coordinates   582038..583534 (+) Length   498 a.a.
NCBI ID   WP_003035572.1    Uniprot ID   I0SFM4
Organism   Streptococcus anginosus subsp. whileyi MAS624     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 577038..588534
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ANG_RS02960 (ANG_0594) amiA3 577510..579486 (+) 1977 WP_003035484.1 peptide ABC transporter substrate-binding protein Regulator
  ANG_RS02965 (ANG_0595) amiA3 579682..581661 (+) 1980 WP_025271648.1 peptide ABC transporter substrate-binding protein Regulator
  ANG_RS02970 (ANG_0596) amiC 582038..583534 (+) 1497 WP_003035572.1 ABC transporter permease Regulator
  ANG_RS02975 (ANG_0597) amiD 583534..584460 (+) 927 WP_003035531.1 oligopeptide ABC transporter permease OppC Regulator
  ANG_RS02980 (ANG_0598) amiE 584469..585536 (+) 1068 WP_020999798.1 ABC transporter ATP-binding protein Regulator
  ANG_RS02985 (ANG_0599) amiF 585547..586470 (+) 924 WP_003031730.1 ATP-binding cassette domain-containing protein Regulator
  ANG_RS02990 - 586656..587480 (+) 825 Protein_577 Cof-type HAD-IIB family hydrolase -
  ANG_RS02995 (ANG_0602) - 587553..588518 (-) 966 WP_003035453.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 498 a.a.        Molecular weight: 55818.98 Da        Isoelectric Point: 10.0752

>NTDB_id=65508 ANG_RS02970 WP_003035572.1 582038..583534(+) (amiC) [Streptococcus anginosus subsp. whileyi MAS624]
MKKYIFMRILRSLVSIFMVTTLTYTIIYTMVPRKLIFKQDPNYNKIATTPDKKTNYENTIFERMGYIDYYDTKELQEKAS
KENSSVTVEPTNANKKIYEAYIKKLGRGWKLQQFKESKQFYATREVPVYERVLGFYGNLIQIDHTGAVKDASNPNLKRYI
RIENDPAIGWSVVGSGTKHKYLLYFNSQFPFIHQNFVRLNLGTSYPTYANLPVLQVISQGQGQTKTSEVQFPTGKKTSSV
NIYTRTYKSPKQADARDVANYGKDDPYTATESNYQYPSMIVSSSIVGLIGLALSYLIAVPLGSYMARFKNTLFDSISTGA
LTFLMSLPTIALVYIIRLIGSAIGLPDSFPILGAGDWRSYVLPAVILGLLSAPWTAVWIRRYMIDLQSQDFVRFARAKGL
SEKEISNKHIFKNAMVPLVSSIPGAIIGVITGATLTETVFAFPGMGKMLIDSVKASNNSMVVGLVFIFTCLSIFALLLGD
ILMTVLDPRIKLTSKGGK

Nucleotide


Download         Length: 1497 bp        

>NTDB_id=65508 ANG_RS02970 WP_003035572.1 582038..583534(+) (amiC) [Streptococcus anginosus subsp. whileyi MAS624]
ATGAAGAAATATATTTTTATGCGTATCTTACGCTCTTTAGTATCTATTTTCATGGTAACAACGCTGACTTACACCATTAT
CTATACCATGGTGCCTAGGAAGTTGATTTTCAAACAGGATCCAAACTATAACAAAATAGCAACAACTCCTGATAAAAAGA
CCAATTACGAAAATACGATTTTTGAGCGCATGGGTTACATTGACTACTATGATACGAAGGAATTGCAAGAAAAAGCTAGT
AAAGAGAATTCCTCTGTAACAGTAGAACCTACTAATGCAAATAAAAAAATCTATGAAGCTTACATCAAAAAGCTGGGACG
CGGTTGGAAATTGCAGCAATTTAAAGAAAGCAAGCAATTTTATGCAACTCGTGAAGTTCCAGTCTATGAACGCGTTCTTG
GTTTCTATGGTAATTTGATTCAAATTGACCATACAGGTGCTGTGAAAGATGCTTCTAATCCGAATTTGAAGCGTTATATT
CGCATTGAAAATGATCCTGCTATTGGTTGGTCTGTTGTTGGTTCTGGAACGAAACATAAATATTTATTATATTTCAATAG
TCAGTTTCCATTTATCCACCAAAATTTTGTAAGATTAAATCTAGGAACTTCTTATCCGACCTATGCTAATCTTCCTGTTT
TACAGGTTATTTCACAAGGGCAAGGTCAAACGAAGACATCAGAAGTTCAATTTCCAACAGGAAAGAAAACATCATCTGTT
AATATTTATACACGTACATATAAGTCTCCAAAGCAAGCCGATGCACGCGATGTTGCTAATTACGGAAAAGATGATCCTTA
TACGGCGACAGAGAGCAATTATCAATATCCATCTATGATTGTGAGCTCTTCTATTGTTGGGTTGATTGGTTTGGCCTTGT
CATACTTAATCGCCGTTCCACTTGGATCTTATATGGCTCGCTTTAAGAATACATTGTTTGATAGTATTTCAACCGGTGCT
TTGACTTTCTTAATGTCACTGCCAACTATTGCCTTGGTTTATATCATTCGCTTGATTGGTTCAGCGATTGGCTTACCTGA
TTCATTCCCTATTTTGGGAGCAGGTGATTGGCGCTCTTATGTGTTGCCGGCAGTTATTCTTGGACTCTTGAGTGCGCCTT
GGACAGCAGTGTGGATTCGCCGTTATATGATTGACTTGCAATCACAAGATTTTGTTCGTTTTGCACGTGCAAAAGGTCTT
TCTGAAAAAGAAATTTCTAATAAACATATTTTCAAAAATGCTATGGTGCCACTTGTATCCAGTATACCTGGTGCTATTAT
CGGAGTTATCACAGGTGCAACTTTGACTGAAACAGTCTTTGCTTTCCCTGGTATGGGTAAGATGTTGATTGACTCTGTTA
AAGCTTCAAACAATTCTATGGTCGTTGGTCTTGTCTTTATCTTTACTTGTCTTTCTATCTTCGCTCTTCTATTGGGTGAT
ATTCTGATGACAGTACTTGACCCACGTATTAAATTAACATCAAAAGGAGGTAAATAA

Domains

Predicted by InterproScan.

Binding-protein-dependent transport system inner membrane component (BPD_transp_1)

(298-491)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I0SFM4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiC Streptococcus salivarius strain HSISS4

80.321

100

0.803
  amiC Streptococcus thermophilus LMG 18311

79.92

100

0.799
  amiC Streptococcus thermophilus LMD-9

79.719

100

0.797

Multiple sequence alignment