Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiF   Type   Regulator
Locus tag   ANG_RS02985 Genome accession   NZ_AP013072
Coordinates   585547..586470 (+) Length   307 a.a.
NCBI ID   WP_003031730.1    Uniprot ID   I0SFK8
Organism   Streptococcus anginosus subsp. whileyi MAS624     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 580547..591470
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ANG_RS02970 (ANG_0596) amiC 582038..583534 (+) 1497 WP_003035572.1 ABC transporter permease Regulator
  ANG_RS02975 (ANG_0597) amiD 583534..584460 (+) 927 WP_003035531.1 oligopeptide ABC transporter permease OppC Regulator
  ANG_RS02980 (ANG_0598) amiE 584469..585536 (+) 1068 WP_020999798.1 ABC transporter ATP-binding protein Regulator
  ANG_RS02985 (ANG_0599) amiF 585547..586470 (+) 924 WP_003031730.1 ATP-binding cassette domain-containing protein Regulator
  ANG_RS02990 - 586656..587480 (+) 825 Protein_577 Cof-type HAD-IIB family hydrolase -
  ANG_RS02995 (ANG_0602) - 587553..588518 (-) 966 WP_003035453.1 LacI family DNA-binding transcriptional regulator -
  ANG_RS03000 (ANG_0603) - 588499..589956 (-) 1458 WP_025271649.1 sucrose-6-phosphate hydrolase -

Sequence

Protein


Download         Length: 307 a.a.        Molecular weight: 34802.03 Da        Isoelectric Point: 6.4261

>NTDB_id=65511 ANG_RS02985 WP_003031730.1 585547..586470(+) (amiF) [Streptococcus anginosus subsp. whileyi MAS624]
MPEKLVEVKDLEISFGEGSKKFVAVKNANFFINKGETFSLVGESGSGKTTIGRAIIGLNDTSHGEIFFEGKKINGKKSKE
EESEIIRKIQMIFQDPAASLNERATVDYIISEGLYNFHLFKDEEERKKKVKDIIHEVGLLSEHLTRYPHEFSGGQRQRIG
IARALVMEPDFVIADEPISALDVSVRAQVLNLLKKFQKDLGLTYLFIAHDLSVVRFISDRIAVIYKGVIVEVAETEELFN
NPIHPYTQSLLSAVPIPDPILERKKVLKVYDAAQHDYSVDKPEMVEIRPGHFVWANKAEVEKYKKEL

Nucleotide


Download         Length: 924 bp        

>NTDB_id=65511 ANG_RS02985 WP_003031730.1 585547..586470(+) (amiF) [Streptococcus anginosus subsp. whileyi MAS624]
ATGCCTGAAAAATTAGTAGAAGTTAAAGATTTGGAAATTTCTTTCGGTGAGGGAAGCAAGAAATTTGTTGCTGTTAAAAA
TGCTAATTTCTTTATCAATAAAGGAGAAACGTTTTCACTTGTAGGAGAATCTGGTTCTGGTAAAACGACAATTGGTCGTG
CGATTATTGGTTTAAATGATACGAGTCATGGAGAGATTTTCTTTGAAGGGAAAAAAATCAATGGCAAAAAATCAAAAGAA
GAAGAGTCAGAAATCATTCGTAAAATTCAAATGATTTTCCAAGACCCTGCTGCTAGTTTGAATGAACGTGCGACAGTTGA
TTATATCATTTCGGAAGGCTTGTATAATTTCCATTTATTTAAAGATGAAGAAGAACGCAAGAAAAAAGTGAAAGATATTA
TTCATGAAGTTGGATTGTTATCAGAGCATTTAACACGTTACCCGCATGAATTTTCTGGTGGTCAACGTCAGCGGATTGGG
ATTGCCCGTGCGCTTGTTATGGAACCAGATTTTGTCATTGCAGATGAGCCGATTTCAGCTTTGGACGTGTCTGTGCGCGC
GCAAGTTTTGAATCTTCTTAAGAAATTCCAAAAAGATCTAGGTTTGACCTATCTTTTCATTGCCCATGATTTATCAGTTG
TACGTTTTATCTCAGACCGTATTGCTGTTATTTATAAGGGTGTGATTGTAGAAGTGGCTGAAACAGAAGAACTCTTCAAT
AATCCAATCCATCCTTATACGCAGTCATTGCTATCTGCTGTCCCAATTCCAGACCCAATATTGGAGCGGAAGAAAGTATT
GAAGGTTTATGATGCTGCTCAACATGATTATTCAGTAGATAAGCCAGAAATGGTTGAAATTCGTCCAGGACACTTTGTCT
GGGCTAATAAAGCAGAAGTTGAAAAGTATAAAAAAGAATTGTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(25-178)

Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY)

(230-262)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I0SFK8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiF Streptococcus thermophilus LMG 18311

87.908

99.674

0.876
  amiF Streptococcus salivarius strain HSISS4

87.908

99.674

0.876
  amiF Streptococcus thermophilus LMD-9

87.582

99.674

0.873

Multiple sequence alignment