Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG985_RS21225 Genome accession   NZ_CP108046
Coordinates   4698267..4699391 (+) Length   374 a.a.
NCBI ID   WP_371669914.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00289     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4693267..4704391
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG985_RS21210 (OG985_21085) - 4693884..4694732 (+) 849 WP_371669911.1 hypothetical protein -
  OG985_RS21215 (OG985_21090) - 4694799..4696538 (-) 1740 WP_371669912.1 hypothetical protein -
  OG985_RS21220 (OG985_21095) radA/sms 4696778..4698187 (+) 1410 WP_371669913.1 DNA repair protein RadA Machinery gene
  OG985_RS21225 (OG985_21100) disA 4698267..4699391 (+) 1125 WP_371669914.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG985_RS21230 (OG985_21105) - 4699663..4700508 (-) 846 WP_371669915.1 hypothetical protein -
  OG985_RS21235 (OG985_21110) - 4700975..4701910 (+) 936 WP_371669916.1 A/G-specific adenine glycosylase -
  OG985_RS21240 (OG985_21115) - 4702159..4702698 (+) 540 WP_356045295.1 SigE family RNA polymerase sigma factor -
  OG985_RS21245 (OG985_21120) - 4702788..4703402 (+) 615 WP_371669917.1 hypothetical protein -
  OG985_RS21250 (OG985_21125) cseB 4703680..4704384 (+) 705 WP_371669918.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40046.78 Da        Isoelectric Point: 4.9130

>NTDB_id=652006 OG985_RS21225 WP_371669914.1 4698267..4699391(+) (disA) [Streptomyces sp. NBC_00289]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTALRDGLERVLRGNTGGLILLGSDKTVESMCTGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSTILRAGVQLLPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALYELNALAHAELLEMPTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=652006 OG985_RS21225 WP_371669914.1 4698267..4699391(+) (disA) [Streptomyces sp. NBC_00289]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAATCCGGTGGGAGTTCCGGTGCCGATGGCCTGATGCGTGCCTCACT
GAGTGCCGTGGCACCGGGCACGGCACTGCGTGACGGCCTCGAGCGGGTACTCCGCGGCAACACCGGCGGTCTCATCCTGC
TCGGCTCCGACAAGACCGTCGAGTCCATGTGCACCGGTGGATTCGTCCTGGATGTCGAGTTCACCGCCACCCGCCTGCGT
GAGCTGTGCAAGCTGGACGGCGGCATCGTGCTGTCCTCGGACCTGTCGACGATCCTGAGGGCCGGCGTGCAGCTGCTCCC
GGACCCGACGATCCCCACCGAGGAGACCGGCACCCGGCACCGCACCGCGGACCGGGTCAGCAAGCAGGTCGGCTTCCCCG
TCGTCTCCGTCTCCCAGTCCATGCGCCTCATCGCGCTGTACGTCGACGGGCAGCGCCGCGTCCTGGAGGACTCGGCGGCG
ATCCTGTCCCGGGCCAACCAGGCCCTCGCCACCCTGGAGCGCTACAAGCTCCGCCTCGACGAGGTCGCGGGCACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTCACCGTCCGGGACGTCTCCGCGGTCGCCCAGCGCCTGGAGATGGTGCGCCGCATCG
CCACCGAAATCGCCGAATACGTGGTCGAACTGGGCACGGACGGCCGCCTTCTCGCCCTCCAGCTCGACGAGTTGATCGCC
GGCGTCGAGCCCGAGCGTGAACTTGTCGTACGGGACTACGTCCCCGAACCCACCGCCAAGCGCTCCCGCACGGTCGACGA
GGCCCTGTACGAGCTCAACGCCCTCGCGCACGCCGAGCTTCTCGAAATGCCCACGGTGGCCCGCGCGTTGGGCTACACCG
GCTCTCCCGAGGCGCTCGACTCGGCGGTGTCCCCGCGGGGCTTCCGCCTGCTGGCGAAGGTGCCGCGGCTGCCGGGCGCG
ATCATCGACCGGCTCGTGGAGCACTTCGGCGGGCTGCAGAAACTGCTCGCCGCGAGCGTGGACGACCTCCAGACGGTCGA
CGGCGTCGGCGAGGCCAGGGCGCGCAGTGTGCGCGAGGGGCTGTCGCGGCTGGCCGAGTCGTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436