Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | L1871_RS04220 | Genome accession | NZ_CP091176 |
| Coordinates | 842538..842855 (-) | Length | 105 a.a. |
| NCBI ID | WP_039041323.1 | Uniprot ID | A0AAJ5ZCA1 |
| Organism | Aeromonas caviae strain SCLZS52 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 837538..847855
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L1871_RS04200 (L1871_04200) | - | 837929..838603 (-) | 675 | WP_039041329.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| L1871_RS04205 (L1871_04205) | - | 838879..839850 (+) | 972 | WP_029314797.1 | response regulator | - |
| L1871_RS04210 (L1871_04210) | - | 839921..841318 (-) | 1398 | WP_041212400.1 | peptide MFS transporter | - |
| L1871_RS04215 (L1871_04215) | galU | 841532..842443 (-) | 912 | WP_103243668.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| L1871_RS04220 (L1871_04220) | comEA | 842538..842855 (-) | 318 | WP_039041323.1 | ComEA family DNA-binding protein | Machinery gene |
| L1871_RS04225 (L1871_04225) | cysQ | 843022..843792 (+) | 771 | WP_039041322.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| L1871_RS04230 (L1871_04230) | - | 843856..844152 (-) | 297 | WP_010675539.1 | YciI family protein | - |
| L1871_RS04235 (L1871_04235) | - | 844177..844728 (-) | 552 | WP_223954870.1 | septation protein A | - |
| L1871_RS04240 (L1871_04240) | - | 844834..846339 (-) | 1506 | WP_049636659.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| L1871_RS04245 (L1871_04245) | trhA | 846531..847163 (+) | 633 | WP_049636658.1 | PAQR family membrane homeostasis protein TrhA | - |
Sequence
Protein
Download Length: 105 a.a. Molecular weight: 10966.84 Da Isoelectric Point: 10.1059
>NTDB_id=648183 L1871_RS04220 WP_039041323.1 842538..842855(-) (comEA) [Aeromonas caviae strain SCLZS52]
MNKKTLIAALLLGCLPLLSQPLLAADKAATKPVATTQVKESGKINLNTASAGELTALKGIGEKKAQAIIDHREKQGKFTS
VDQLADVSGIGSATLEANRDMIIVK
MNKKTLIAALLLGCLPLLSQPLLAADKAATKPVATTQVKESGKINLNTASAGELTALKGIGEKKAQAIIDHREKQGKFTS
VDQLADVSGIGSATLEANRDMIIVK
Nucleotide
Download Length: 318 bp
>NTDB_id=648183 L1871_RS04220 WP_039041323.1 842538..842855(-) (comEA) [Aeromonas caviae strain SCLZS52]
ATGAACAAGAAAACCCTGATCGCCGCACTGCTGCTGGGCTGCCTCCCCCTGTTGAGCCAACCTCTGCTGGCCGCCGACAA
GGCGGCGACCAAGCCTGTGGCCACCACCCAAGTCAAGGAGAGCGGCAAGATCAATCTCAATACCGCCAGTGCCGGCGAGC
TCACCGCCCTGAAGGGCATTGGCGAGAAGAAGGCACAGGCCATCATCGACCACAGAGAGAAGCAGGGCAAGTTCACCTCC
GTCGATCAACTGGCGGACGTCAGTGGAATCGGATCGGCCACGCTGGAAGCAAACCGGGACATGATTATCGTCAAGTAA
ATGAACAAGAAAACCCTGATCGCCGCACTGCTGCTGGGCTGCCTCCCCCTGTTGAGCCAACCTCTGCTGGCCGCCGACAA
GGCGGCGACCAAGCCTGTGGCCACCACCCAAGTCAAGGAGAGCGGCAAGATCAATCTCAATACCGCCAGTGCCGGCGAGC
TCACCGCCCTGAAGGGCATTGGCGAGAAGAAGGCACAGGCCATCATCGACCACAGAGAGAAGCAGGGCAAGTTCACCTCC
GTCGATCAACTGGCGGACGTCAGTGGAATCGGATCGGCCACGCTGGAAGCAAACCGGGACATGATTATCGTCAAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
50 |
100 |
0.505 |
| comEA | Vibrio cholerae strain A1552 |
50 |
100 |
0.505 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
47.664 |
100 |
0.486 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
45.045 |
100 |
0.476 |
| comEA | Legionella pneumophila strain ERS1305867 |
44 |
95.238 |
0.419 |
| comEA | Legionella pneumophila str. Paris |
44 |
95.238 |
0.419 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
51.852 |
77.143 |
0.4 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
43.75 |
91.429 |
0.4 |
| comEA/celA/cilE | Streptococcus mitis SK321 |
54.795 |
69.524 |
0.381 |