Detailed information NTG0647688

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: OHN37_RS02615
• Genome accession: NZ_CP107878
• Coordinates: 577458..578096 (+)
• Length: 212 a.a.
• NCBI ID: WP_266587716.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00485
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 572458..583096

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHN37_RS02600 (OHN37_02580)	-	572872..575400 (+)	2529	WP_327666486.1	beta-L-arabinofuranosidase domain-containing protein	-
OHN37_RS02605 (OHN37_02585)	-	575453..575935 (-)	483	WP_327666487.1	VOC family protein	-
OHN37_RS02610 (OHN37_02590)	-	576060..577349 (+)	1290	WP_327666488.1	epoxide hydrolase family protein	-
OHN37_RS02615 (OHN37_02595)	clpP	577458..578096 (+)	639	WP_266587716.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHN37_RS02620 (OHN37_02600)	clpP	578098..578700 (+)	603	WP_266530955.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHN37_RS02625 (OHN37_02605)	-	578722..579147 (-)	426	WP_266530953.1	helix-turn-helix transcriptional regulator	-
OHN37_RS02630 (OHN37_02610)	-	579229..580014 (+)	786	WP_266530951.1	class I SAM-dependent methyltransferase	-
OHN37_RS02635 (OHN37_02615)	-	580114..581001 (+)	888	WP_266530949.1	RNA polymerase sigma factor SigF	-
OHN37_RS02640 (OHN37_02620)	-	581056..581511 (-)	456	WP_266587712.1	ATP-binding protein	-
OHN37_RS02645 (OHN37_02625)	-	581657..582838 (-)	1182	WP_327666489.1	DUF6777 domain-containing protein	-

Sequence

Protein

• Length: 212 a.a.
• Molecular weight: 22986.06 Da
• Isoelectric Point: 4.9066

>NTDB_id=647688 OHN37_RS02615 WP_266587716.1 577458..578096(+) (clpP) [Streptomyces sp. NBC_00485]
MTPLTTLSPRAEEGDTPPGRFDEHLAAQLLGQRIVFLATQVDEVSATRVCAQLLLLSAEDPRTDISLYINSPGGSVHAGL
AIYDTMRLIPNDVSTLAMGFAASMGQFLLCGGTPGKRYALPNARIMMHQGSAGIGGTTADIEIQAENLEHTKQTMERLIA
ENTGQTPETIARDGDRDRWFTAEEARQYGMVDRVLESLADVRPAASKRRMGL

Nucleotide

• Length: 639 bp

>NTDB_id=647688 OHN37_RS02615 WP_266587716.1 577458..578096(+) (clpP) [Streptomyces sp. NBC_00485]
ATGACTCCACTGACCACGCTCTCGCCCCGCGCCGAGGAGGGCGACACTCCACCCGGCCGGTTCGACGAGCATCTCGCGGC
CCAACTCCTCGGCCAGCGCATCGTGTTCCTCGCCACCCAGGTCGACGAGGTGTCCGCGACCCGGGTCTGCGCGCAGCTGC
TCCTGCTGTCCGCCGAGGACCCGCGCACCGACATCAGCCTGTACATCAACAGCCCGGGCGGATCCGTGCACGCGGGCCTC
GCCATCTACGACACGATGCGGCTGATCCCGAACGACGTCTCCACGCTCGCCATGGGCTTCGCGGCCAGCATGGGCCAGTT
CCTGCTCTGCGGCGGCACACCGGGCAAGCGGTACGCCCTGCCGAACGCGCGGATCATGATGCACCAGGGGTCGGCGGGCA
TCGGCGGCACCACCGCCGACATCGAGATCCAGGCGGAGAACCTGGAGCACACCAAGCAGACGATGGAGCGGCTCATCGCC
GAGAACACGGGCCAGACCCCGGAGACCATCGCCCGGGACGGCGACCGCGACCGCTGGTTCACGGCCGAGGAGGCCAGGCA
GTACGGCATGGTGGACCGGGTGCTGGAGTCGCTCGCCGACGTCCGCCCGGCCGCCTCGAAGCGACGGATGGGGCTGTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (26-196)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	48.315	83.962	0.406
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.555	81.604	0.396
clpP	Streptococcus pyogenes MGAS315	45.652	86.792	0.396
clpP	Streptococcus pyogenes JRS4	45.652	86.792	0.396
clpP	Streptococcus pneumoniae TIGR4	45.604	85.849	0.392
clpP	Streptococcus pneumoniae Rx1	45.604	85.849	0.392
clpP	Streptococcus pneumoniae D39	45.604	85.849	0.392
clpP	Streptococcus pneumoniae R6	45.604	85.849	0.392
clpP	Streptococcus mutans UA159	44.022	86.792	0.382
clpP	Streptococcus thermophilus LMG 18311	43.956	85.849	0.377
clpP	Streptococcus thermophilus LMD-9	43.956	85.849	0.377
clpP	Lactococcus lactis subsp. cremoris KW2	45.143	82.547	0.373
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	44.571	82.547	0.368