Detailed information NTG0647040

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: OHQ36_RS03720
• Genome accession: NZ_CP107860
• Coordinates: 743957..744610 (+)
• Length: 217 a.a.
• NCBI ID: WP_330302289.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00500
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 738957..749610

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHQ36_RS03700 (OHQ36_03675)	-	739555..741342 (+)	1788	WP_330302285.1	ABC transporter ATP-binding protein	-
OHQ36_RS03705 (OHQ36_03680)	-	741451..741933 (-)	483	WP_330302286.1	VOC family protein	-
OHQ36_RS03710 (OHQ36_03685)	-	742058..743254 (+)	1197	WP_330302287.1	epoxide hydrolase family protein	-
OHQ36_RS03715 (OHQ36_03690)	-	743386..743817 (+)	432	WP_330302288.1	(2Fe-2S) ferredoxin domain-containing protein	-
OHQ36_RS03720 (OHQ36_03695)	clpP	743957..744610 (+)	654	WP_330302289.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHQ36_RS03725 (OHQ36_03700)	clpP	744612..745214 (+)	603	WP_330302290.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHQ36_RS03730 (OHQ36_03705)	-	745255..745707 (-)	453	WP_330302291.1	helix-turn-helix transcriptional regulator	-
OHQ36_RS03735 (OHQ36_03710)	-	745789..746310 (-)	522	WP_330309969.1	DinB family protein	-
OHQ36_RS03740 (OHQ36_03715)	-	746469..746951 (+)	483	WP_330302292.1	hypothetical protein	-
OHQ36_RS03745 (OHQ36_03720)	-	747006..748736 (+)	1731	WP_406501278.1	multicopper oxidase family protein	-

Sequence

Protein

• Length: 217 a.a.
• Molecular weight: 23660.74 Da
• Isoelectric Point: 4.9265

>NTDB_id=647040 OHQ36_RS03720 WP_330302289.1 743957..744610(+) (clpP) [Streptomyces sp. NBC_00500]
MTPLITGWDPARAPRAEEGDTPATRFDDHLAAQLLAQRIVFLGTQVDEVSANRVCAQLLLLSAEDARTDISLYLNSPGGS
VTAGLAIYDTMRLIPNDVSTLVMGFAASMGQFLLSVGTHGKRFALPNARIMMHQPSAGIGGTTADIEIQAQNLEFTKKAI
ERITAEHTGQSEETISRDGDRDRWFTAEQAKEYGMVDRVVESLDDVRPAASRRRMGL

Nucleotide

• Length: 654 bp

>NTDB_id=647040 OHQ36_RS03720 WP_330302289.1 743957..744610(+) (clpP) [Streptomyces sp. NBC_00500]
ATGACTCCACTCATCACCGGCTGGGACCCGGCCCGTGCGCCACGGGCCGAGGAGGGCGACACCCCTGCGACACGCTTCGA
CGACCATCTGGCCGCGCAGCTGCTCGCCCAGCGGATCGTCTTTCTCGGCACGCAGGTCGACGAGGTCTCCGCGAACCGGG
TCTGCGCGCAACTGCTCCTGCTGTCGGCGGAGGACGCGCGGACCGACATCAGCCTGTACCTCAACAGTCCGGGCGGATCG
GTGACCGCGGGCCTCGCGATCTACGACACGATGCGGCTGATCCCGAACGACGTCTCGACGCTCGTCATGGGATTCGCGGC
GAGCATGGGCCAGTTCCTGCTCAGCGTGGGCACGCATGGGAAGCGCTTCGCGCTGCCGAACGCGCGGATCATGATGCACC
AGCCGTCGGCCGGCATCGGCGGCACCACCGCCGACATCGAAATCCAGGCGCAGAACCTGGAGTTCACGAAGAAGGCCATC
GAGCGGATCACCGCGGAGCACACCGGCCAGAGCGAGGAGACGATCTCCCGGGACGGCGACCGCGACCGCTGGTTCACGGC
CGAGCAGGCCAAGGAATACGGCATGGTTGACCGGGTCGTGGAGTCGCTCGACGACGTCCGCCCGGCCGCGTCACGGCGCC
GGATGGGACTCTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (30-201)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	48.315	82.028	0.396
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	49.419	79.263	0.392
clpP	Streptococcus pneumoniae D39	48.555	79.724	0.387
clpP	Streptococcus pneumoniae R6	48.555	79.724	0.387
clpP	Streptococcus pneumoniae TIGR4	48.555	79.724	0.387
clpP	Streptococcus pneumoniae Rx1	48.555	79.724	0.387
clpP	Lactococcus lactis subsp. cremoris KW2	48	80.645	0.387
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	47.429	80.645	0.382
clpP	Streptococcus pyogenes JRS4	47.429	80.645	0.382
clpP	Streptococcus pyogenes MGAS315	47.429	80.645	0.382
clpP	Streptococcus thermophilus LMG 18311	46.821	79.724	0.373
clpP	Streptococcus thermophilus LMD-9	46.821	79.724	0.373
clpP	Streptococcus mutans UA159	45.714	80.645	0.369