Detailed information NTG0646836

Bioinformatically predicted

Overview

• Name: rpoS
• Type: Regulator
• Locus tag: OHN73_RS26805
• Genome accession: NZ_CP107839
• Coordinates: 5733792..5734790 (+)
• Length: 332 a.a.
• NCBI ID: WP_266516034.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00519
• Function: regulation of chitinases (predicted from homology) Competence regulation

Genomic Context

Location: 5728792..5739790

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHN73_RS26780 (OHN73_26670)	-	5729087..5729752 (+)	666	WP_266516047.1	TetR/AcrR family transcriptional regulator	-
OHN73_RS26785 (OHN73_26675)	-	5729891..5731438 (+)	1548	WP_266516044.1	MFS transporter	-
OHN73_RS26790 (OHN73_26680)	-	5731547..5732077 (-)	531	WP_266516042.1	MarR family winged helix-turn-helix transcriptional regulator	-
OHN73_RS26795 (OHN73_26685)	-	5732217..5733008 (+)	792	WP_266516039.1	dioxygenase	-
OHN73_RS26800 (OHN73_26690)	-	5733078..5733596 (-)	519	WP_328431675.1	N-acetyltransferase family protein	-
OHN73_RS26805 (OHN73_26695)	rpoS	5733792..5734790 (+)	999	WP_266516034.1	RNA polymerase sigma factor RpoD/SigA	Regulator
OHN73_RS26810 (OHN73_26700)	-	5735426..5736049 (+)	624	WP_266842155.1	TetR/AcrR family transcriptional regulator	-
OHN73_RS26815 (OHN73_26705)	-	5736447..5736569 (+)	123	WP_266516031.1	hypothetical protein	-
OHN73_RS26820 (OHN73_26710)	-	5736668..5737633 (-)	966	WP_266516028.1	YafY family protein	-
OHN73_RS26825 (OHN73_26715)	-	5737696..5739270 (+)	1575	WP_266516026.1	MFS transporter	-
OHN73_RS26830 (OHN73_26720)	-	5739401..5739601 (+)	201	WP_266516023.1	hypothetical protein	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 37172.96 Da
• Isoelectric Point: 5.0564

>NTDB_id=646836 OHN73_RS26805 WP_266516034.1 5733792..5734790(+) (rpoS) [Streptomyces sp. NBC_00519]
MATRAVARRKSATGETADAASSVRAHAGEIADRDLVGMYLDEIARTPLLDAAKEVELSQIIEAGVFARQVLDGDEESKAE
ASREELQALVDDGERAKDVFIRSNLRLVVAVARRYPRSGLPLLDLIQEGNAGLVRAVEKFDYAKGFKFSTYATWWIRQAI
TRSIADQSRTIRLPVHLVEELGRIRRVQREFNREHGRDPEPAEIAAELDTKPERVIDVLDWARDPVSLNMAVDDEGETQF
GDLLEDTSAVSPEQSVLTLLRSEELDHLIGRLDPRTASIIKMRYGIDDGRERTLTEVGKEHGLTRERIRQIEKHALLELK
KLARSTGFEAAA

Nucleotide

• Length: 999 bp

>NTDB_id=646836 OHN73_RS26805 WP_266516034.1 5733792..5734790(+) (rpoS) [Streptomyces sp. NBC_00519]
ATGGCAACCCGTGCCGTCGCCCGTCGTAAGTCCGCCACCGGCGAGACGGCCGACGCGGCAAGCAGTGTTCGCGCTCACGC
CGGCGAGATCGCCGACCGTGACCTGGTCGGCATGTACCTCGACGAGATCGCGCGCACGCCGCTGCTCGACGCTGCCAAGG
AGGTCGAGCTGTCACAGATCATCGAGGCGGGTGTGTTCGCGCGACAGGTCCTCGACGGAGACGAGGAGTCCAAGGCCGAG
GCCTCCCGCGAGGAGCTTCAGGCCCTGGTCGACGACGGCGAGCGGGCGAAGGACGTCTTCATCCGCTCCAACCTCCGCCT
GGTCGTGGCCGTGGCCCGGCGCTACCCGCGCAGCGGCCTCCCCCTCCTCGACCTGATCCAGGAGGGCAACGCCGGACTGG
TGCGCGCAGTCGAGAAGTTCGACTACGCCAAGGGCTTCAAGTTCTCGACGTACGCGACCTGGTGGATCCGTCAGGCGATC
ACCCGCTCGATAGCGGACCAGTCGCGCACCATCCGCCTGCCCGTCCACCTGGTGGAGGAGCTGGGCCGGATCCGCCGTGT
GCAGCGCGAGTTCAACCGCGAGCACGGCCGCGACCCGGAGCCCGCGGAGATCGCCGCGGAGCTCGACACGAAGCCGGAGC
GCGTGATCGACGTCCTGGACTGGGCCCGCGACCCGGTCTCCCTGAACATGGCCGTGGACGACGAGGGCGAGACCCAGTTC
GGCGACCTGCTGGAGGACACCTCGGCGGTCTCCCCGGAGCAGTCCGTCCTGACCCTGCTGCGCAGCGAGGAGCTCGACCA
CCTCATCGGCCGCCTCGACCCGCGCACGGCCTCCATCATCAAGATGCGCTACGGCATCGACGACGGCCGCGAGCGCACCC
TGACGGAGGTCGGCAAGGAACACGGCCTGACCCGCGAGCGCATCCGCCAGATCGAGAAGCACGCCCTGCTGGAGCTTAAG
AAGCTGGCCCGGTCCACGGGCTTCGAGGCGGCGGCCTGA

Domains

Predicted by InterProScan.

• Sigma-70 region 3 (Sigma70_r3) (179-255)

• Sigma-70 region 2 (Sigma70_r2) (100-169)

• Sigma-70 factor, region 1.2 (Sigma70_r1_2) (34-67)

• Sigma-70, region 4 (Sigma70_r4) (269-321)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rpoS	Vibrio cholerae O1 biovar El Tor strain E7946	40.134	90.06	0.361