Detailed information NTG0646574

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: OHS33_RS12055
• Genome accession: NZ_CP107819
• Coordinates: 2770018..2770692 (-)
• Length: 224 a.a.
• NCBI ID: WP_330330390.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00536
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2765018..2775692

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHS33_RS12035 (OHS33_12030)	-	2766304..2766978 (+)	675	WP_330330386.1	hypothetical protein	-
OHS33_RS12040 (OHS33_12035)	-	2767095..2768078 (+)	984	WP_330330387.1	hypothetical protein	-
OHS33_RS12045 (OHS33_12040)	-	2768133..2768405 (-)	273	WP_330330388.1	hypothetical protein	-
OHS33_RS12050 (OHS33_12045)	clpX	2768580..2769866 (-)	1287	WP_330330389.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHS33_RS12055 (OHS33_12050)	clpP	2770018..2770692 (-)	675	WP_330330390.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHS33_RS12060 (OHS33_12055)	-	2770783..2771400 (-)	618	WP_053674923.1	ATP-dependent Clp protease proteolytic subunit	-
OHS33_RS12065 (OHS33_12060)	tig	2771722..2773128 (-)	1407	WP_330330391.1	trigger factor	-
OHS33_RS12080 (OHS33_12075)	-	2773719..2774882 (-)	1164	WP_330330392.1	site-specific integrase	-
OHS33_RS12085 (OHS33_12080)	-	2774882..2775085 (-)	204	WP_330330393.1	excisionase family DNA-binding protein	-

Sequence

Protein

• Length: 224 a.a.
• Molecular weight: 24617.14 Da
• Isoelectric Point: 4.7870

>NTDB_id=646574 OHS33_RS12055 WP_330330390.1 2770018..2770692(-) (clpP) [Streptomyces sp. NBC_00536]
MVKTPMYMNNLSPASGLHTGPQVDNRYVIPRFVERTSQGVREYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMD
PDRDISIYINSPGGSFTALTAIYDTMQFVKPDIQTVCMGQAASAAAVLLAAGTPGKRMALPNARVLIHQPSGGTGREQLS
DLEIAANEILRMRDQLETMLAKHSTTPLEKIRDDIERDKILTAEDALAYGLIDQIVSTRKSNAV

Nucleotide

• Length: 675 bp

>NTDB_id=646574 OHS33_RS12055 WP_330330390.1 2770018..2770692(-) (clpP) [Streptomyces sp. NBC_00536]
ATGGTGAAAACCCCGATGTACATGAACAACCTCTCTCCCGCGAGCGGCCTCCACACCGGTCCGCAGGTGGACAACCGCTA
CGTCATCCCGCGCTTCGTCGAGCGCACCTCGCAGGGCGTGCGCGAGTACGACCCGTACGCGAAGCTCTTCGAGGAGCGCG
TGATCTTCCTCGGCGTGCAGATCGACGACGCGTCCGCCAACGACGTCATGGCGCAGCTGCTGTGCCTGGAGTCGATGGAC
CCGGACCGCGACATCTCCATCTACATCAACAGCCCCGGTGGCTCCTTCACCGCGCTGACGGCGATCTACGACACGATGCA
GTTCGTGAAGCCGGACATCCAGACGGTCTGCATGGGCCAGGCGGCCTCCGCCGCCGCCGTCCTGCTGGCCGCCGGTACTC
CGGGCAAGCGCATGGCGCTGCCGAACGCCCGCGTGCTGATCCACCAGCCGTCCGGCGGCACCGGCCGCGAGCAGCTCTCC
GACCTGGAGATCGCGGCCAACGAGATCCTGCGCATGCGCGACCAGCTGGAGACCATGCTGGCCAAGCACTCGACGACGCC
GCTGGAGAAGATCCGCGACGACATCGAGCGCGACAAGATCCTGACGGCCGAGGACGCGCTCGCGTACGGCCTGATCGACC
AGATCGTCTCCACCCGCAAGAGCAACGCGGTCTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (38-218)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	53.684	84.821	0.455
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	50	83.929	0.42
clpP	Streptococcus pneumoniae D39	45.408	87.5	0.397
clpP	Streptococcus pneumoniae Rx1	45.408	87.5	0.397
clpP	Streptococcus pneumoniae R6	45.408	87.5	0.397
clpP	Streptococcus pneumoniae TIGR4	45.408	87.5	0.397
clpP	Streptococcus pyogenes JRS4	45.876	86.607	0.397
clpP	Streptococcus thermophilus LMG 18311	45.876	86.607	0.397
clpP	Streptococcus thermophilus LMD-9	45.876	86.607	0.397
clpP	Streptococcus pyogenes MGAS315	45.876	86.607	0.397
clpP	Streptococcus mutans UA159	46.316	84.821	0.393
clpP	Lactococcus lactis subsp. cremoris KW2	46.073	85.268	0.393
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	45.026	85.268	0.384