Detailed information NTG0641862

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: LZG54_RS01210
• Genome accession: NZ_CP090382
• Coordinates: 257164..258222 (+)
• Length: 352 a.a.
• NCBI ID: WP_179991402.1
• Uniprot ID: -
• Organism: Acinetobacter towneri strain SCLZS30
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 252164..263222

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LZG54_RS01195 (LZG54_01195)	mraY	252379..253497 (+)	1119	WP_019836136.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-
LZG54_RS01200 (LZG54_01200)	-	253569..254372 (+)	804	WP_234114353.1	putative RNA methyltransferase	-
LZG54_RS01205 (LZG54_01205)	ponA	254442..256994 (-)	2553	WP_234114354.1	penicillin-binding protein PBP1a	-
LZG54_RS01210 (LZG54_01210)	pilM	257164..258222 (+)	1059	WP_179991402.1	pilus assembly protein PilM	Machinery gene
LZG54_RS01215 (LZG54_01215)	pilN	258222..258857 (+)	636	WP_004974461.1	PilN domain-containing protein	Machinery gene
LZG54_RS01220 (LZG54_01220)	comO	258854..259561 (+)	708	WP_234114355.1	type 4a pilus biogenesis protein PilO	Machinery gene
LZG54_RS01225 (LZG54_01225)	pilP	259561..260085 (+)	525	WP_104852650.1	pilus assembly protein PilP	Machinery gene
LZG54_RS01230 (LZG54_01230)	pilQ	260146..262287 (+)	2142	WP_234114976.1	type IV pilus secretin PilQ	Machinery gene
LZG54_RS01235 (LZG54_01235)	aroK	262325..262855 (+)	531	WP_234114356.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 38946.57 Da
• Isoelectric Point: 4.5796

>NTDB_id=641862 LZG54_RS01210 WP_179991402.1 257164..258222(+) (pilM) [Acinetobacter towneri strain SCLZS30]
MRRLYRKPSKGLIGVDISSTSVKLLELSVKNGRYWVESYALVPLPEGSVVEKNILNPEAVGDALERALNLANTQSTSAAL
AIPTSMVITKIIEMDADMTSDEREVQIRMDAEQYIPFPLDEVSLDFEVQPDRLANPNRVNVLLVATRLENVEARVEALDL
GGLTAKIADVESFAIENAFKVFSDTLPMGVNTIGILDIGHTMTTLSVLQNNKIIYTREQTFGGKQLTQEIQNRYGLSYEE
AGRAKKSRTLPDDYDVEVLEPFLEAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQIDIKRIESDAPSLMVACGLAMRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=641862 LZG54_RS01210 WP_179991402.1 257164..258222(+) (pilM) [Acinetobacter towneri strain SCLZS30]
GTGCGTAGGTTATATCGTAAGCCAAGTAAGGGGTTAATAGGTGTAGATATTAGTTCTACTTCTGTTAAGTTATTAGAACT
CTCTGTTAAGAATGGTAGATACTGGGTCGAGAGCTATGCGCTGGTCCCACTTCCAGAAGGCAGTGTGGTTGAAAAAAACA
TTCTCAATCCAGAAGCAGTCGGGGATGCGCTTGAACGTGCATTGAACTTAGCAAACACGCAATCTACATCTGCAGCATTA
GCAATTCCAACCTCAATGGTGATTACCAAAATCATTGAAATGGATGCAGATATGACTAGCGATGAGCGTGAAGTTCAAAT
TCGTATGGACGCCGAGCAATATATTCCATTCCCATTAGATGAAGTCAGCCTAGATTTTGAAGTCCAACCAGACCGTTTAG
CCAATCCAAACCGCGTCAATGTATTACTGGTTGCAACACGTTTAGAAAACGTAGAAGCACGAGTAGAAGCATTGGATTTA
GGTGGATTGACCGCCAAAATTGCCGATGTCGAAAGTTTTGCCATCGAAAATGCCTTTAAAGTGTTCTCCGATACCCTGCC
AATGGGTGTGAACACCATTGGTATTTTGGATATTGGTCATACCATGACCACCTTGTCGGTACTGCAAAATAACAAAATTA
TTTATACCCGCGAGCAAACCTTTGGCGGTAAGCAGCTGACACAAGAAATTCAAAACCGTTATGGTTTGTCGTATGAAGAA
GCAGGGCGCGCGAAAAAAAGCCGTACTTTGCCAGATGACTACGATGTAGAAGTGCTCGAACCGTTCTTAGAAGCGGTGGT
GCAACAAGCGGCACGTTCATTGCAGTTTTTCTTTTCATCTTCACAATTTAATGAAATTGATCACATTTTATTGGCAGGGG
GGAATGCCAATATTCCAGGTCTTGCGAAGTTGTTGCAGCAAAAACTGGGCTACCGTGTGACCATTGCCAATCCATTCTTA
CAAATGGGCTTCTCTCCACAAATCGACATTAAAAGAATTGAAAGTGATGCGCCGTCATTGATGGTGGCATGTGGTTTAGC
AATGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	83.807	100	0.838
comM	Acinetobacter nosocomialis M2	83.807	100	0.838
comM	Acinetobacter baylyi ADP1	78.693	100	0.787
pilM	Legionella pneumophila strain ERS1305867	39.831	100	0.401