Detailed information NTG0639566

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: LU276_RS07160
• Genome accession: NZ_CP089974
• Coordinates: 1497669..1498973 (-)
• Length: 434 a.a.
• NCBI ID: WP_284673175.1
• Uniprot ID: -
• Organism: Moraxella haemolytica strain ZY171148
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1492669..1503973

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LU276_RS07130 (LU276_07065)	-	1492776..1493246 (+)	471	WP_284673171.1	Dps family protein	-
LU276_RS07135 (LU276_07070)	gloA	1493435..1493965 (-)	531	WP_284674610.1	lactoylglutathione lyase	-
LU276_RS07140 (LU276_07075)	-	1494018..1494641 (-)	624	WP_284673172.1	carbonic anhydrase	-
LU276_RS07145 (LU276_07080)	-	1494669..1495607 (-)	939	WP_284673173.1	hypothetical protein	-
LU276_RS07150 (LU276_07085)	aroB	1495651..1496772 (-)	1122	WP_284674611.1	3-dehydroquinate synthase	-
LU276_RS07155 (LU276_07090)	-	1496915..1497445 (-)	531	WP_418001292.1	shikimate kinase	-
LU276_RS07160 (LU276_07095)	pilQ	1497669..1498973 (-)	1305	WP_284673175.1	type IV pilus secretin PilQ	Machinery gene
LU276_RS07165 (LU276_07100)	-	1499023..1499718 (-)	696	WP_284673176.1	pilus assembly protein PilP	-
LU276_RS07170 (LU276_07105)	-	1499708..1500346 (-)	639	WP_284673177.1	type 4a pilus biogenesis protein PilO	-
LU276_RS07175 (LU276_07110)	-	1500343..1500954 (-)	612	WP_284673178.1	PilN domain-containing protein	-
LU276_RS07180 (LU276_07115)	pilM	1500954..1502246 (-)	1293	WP_284673179.1	type IV pilus biogenesis protein PilM	-
LU276_RS07185 (LU276_07120)	-	1502309..1502584 (-)	276	WP_284673180.1	hypothetical protein	-

Sequence

Protein

• Length: 434 a.a.
• Molecular weight: 47279.20 Da
• Isoelectric Point: 5.5114

>NTDB_id=639566 LU276_RS07160 WP_284673175.1 1497669..1498973(-) (pilQ) [Moraxella haemolytica strain ZY171148]
MKKLWLLCVLMLCGESLANTPQGSDRISVAFQDMPVRAVLDVLAHAGGANIVASDGVIGNMTLRLNNVPWMQALDIVVET
KHLIKQEKDGVIIISSPTELAQVTQKNTLAKRQAEQYLPLDTQYIRVNYADAKNLLALITYKSDGENKEGMLSARGVANV
DTRTNTLVIKDIKDNIEQIQALVERLDVPVKQVMIEARIVSANDGFSRELGVNFGVLSHGNHLQIGSSYNTLWDLRRTGG
STAIRPDNLSVNLGAPNPVGRIAFGLVNLPDALLDLELSAMQADQRGEVISTPKVLTADKQTARISSGMQIAYEEETSSG
ATNVVFKEAALVLEATPTITPDGKITLKLNVKNGTPVSNLGAIAIQEDSLETNVIVDDGQTVVLGGIYRQNNQHGVTKVP
FFGDLPIVGRLFRQDNRRDNKEELLIFVTPRLMP

Nucleotide

• Length: 1305 bp

>NTDB_id=639566 LU276_RS07160 WP_284673175.1 1497669..1498973(-) (pilQ) [Moraxella haemolytica strain ZY171148]
ATGAAAAAGCTGTGGTTGCTATGTGTGCTGATGTTATGTGGTGAATCGCTTGCTAATACACCACAAGGCAGTGATAGGAT
TTCGGTGGCATTTCAGGATATGCCTGTGCGTGCAGTGCTTGATGTATTGGCACACGCAGGCGGGGCGAATATTGTCGCTA
GTGATGGGGTGATCGGCAATATGACACTGCGTCTTAATAATGTGCCATGGATGCAAGCACTTGACATTGTTGTTGAGACC
AAGCATCTCATCAAACAGGAAAAAGATGGTGTCATCATCATATCATCGCCCACCGAACTTGCTCAAGTTACCCAAAAAAA
TACCCTAGCCAAGCGACAAGCAGAGCAATATCTTCCTTTGGATACTCAGTACATTCGTGTCAATTATGCCGATGCCAAAA
ATTTGTTAGCACTAATCACCTACAAAAGCGATGGTGAGAATAAAGAGGGTATGTTGTCTGCCAGAGGCGTGGCAAATGTT
GATACTCGCACCAACACGCTTGTCATCAAGGATATTAAGGATAATATTGAGCAAATCCAAGCTCTTGTTGAAAGGCTTGA
CGTGCCTGTCAAGCAGGTAATGATTGAGGCAAGAATTGTCAGTGCTAATGATGGATTTAGTCGAGAGCTTGGTGTGAATT
TTGGGGTCTTGTCGCATGGTAATCATCTACAAATCGGCAGCTCTTACAATACTTTATGGGATTTAAGACGCACCGGTGGC
AGTACCGCTATCCGACCTGATAACTTATCGGTCAATTTGGGTGCACCCAATCCTGTAGGACGAATTGCTTTTGGATTGGT
CAATCTACCTGATGCTTTGCTTGATTTAGAGCTGTCCGCCATGCAGGCAGATCAGCGAGGTGAGGTCATCTCCACACCAA
AGGTTCTTACCGCAGATAAGCAGACAGCTCGTATCTCATCGGGTATGCAGATTGCCTATGAAGAAGAGACTTCAAGTGGT
GCAACCAATGTGGTCTTTAAAGAAGCGGCTTTGGTCTTAGAGGCGACACCAACCATCACTCCAGATGGTAAAATTACGCT
CAAATTGAATGTAAAAAATGGCACGCCTGTTAGCAATCTGGGGGCAATCGCCATTCAAGAAGATTCGCTTGAGACCAATG
TCATCGTTGATGATGGGCAAACGGTGGTGCTAGGCGGTATTTATCGGCAAAATAATCAACATGGCGTAACCAAAGTACCA
TTTTTTGGCGACCTACCGATTGTGGGTAGGTTATTTCGCCAAGATAATCGCCGTGATAATAAAGAAGAATTGCTTATTTT
TGTTACACCCAGACTCATGCCATGA

Domains

Predicted by InterproScan.

• Bacterial type II and III secretion system protein (Secretin) (280-433)

• Bacterial type II/III secretion system short domain (Secretin_N) (122-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Acinetobacter baumannii D1279779	46.753	100	0.498
pilQ	Acinetobacter baumannii strain A118	46.753	100	0.498
comQ	Acinetobacter baylyi ADP1	45.89	100	0.463
pilQ	Vibrio campbellii strain DS40M4	43.868	97.696	0.429
pilQ	Vibrio cholerae strain A1552	43.51	95.853	0.417
pilQ	Vibrio cholerae O1 biovar El Tor strain E7946	43.51	95.853	0.417
pilQ	Legionella pneumophila strain ERS1305867	42.005	96.544	0.406
pilQ	Legionella pneumophila strain Lp02	42.005	96.544	0.406
pilQ	Pseudomonas aeruginosa PAK	40.559	98.848	0.401