Detailed information NTG0632213

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: N5913_RS17005
• Genome accession: NZ_CP104649
• Coordinates: 3254095..3255078 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain PNUSAE008512
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3249095..3260078

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N5913_RS16980 (N5913_16980)	bcsF	3249256..3249447 (+)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-
N5913_RS16985 (N5913_16985)	bcsG	3249444..3251123 (+)	1680	WP_000191596.1	cellulose biosynthesis protein BcsG	-
N5913_RS16990 (N5913_16990)	ldrD	3251210..3251317 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
N5913_RS16995 (N5913_16995)	yhjV	3251793..3253064 (+)	1272	WP_001301684.1	aromatic amino acid transport family protein	-
N5913_RS17000 (N5913_17000)	dppF	3253094..3254098 (-)	1005	WP_000107027.1	dipeptide ABC transporter ATP-binding subunit DppF	-
N5913_RS17005 (N5913_17005)	amiE	3254095..3255078 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
N5913_RS17010 (N5913_17010)	dppC	3255089..3255991 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
N5913_RS17015 (N5913_17015)	dppB	3256001..3257020 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
N5913_RS17020 (N5913_17020)	dppA	3257171..3258778 (-)	1608	WP_001222888.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=632213 N5913_RS17005 WP_001196486.1 3254095..3255078(-) (amiE) [Escherichia coli strain PNUSAE008512]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=632213 N5913_RS17005 WP_001196486.1 3254095..3255078(-) (amiE) [Escherichia coli strain PNUSAE008512]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATTAG
CTACAGCGTAAAACAGGGCGAAGTAGTCGGGATTGTGGGTGAGTCTGGCTCCGGTAAGTCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTGATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCGGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGTCGTCAGCGGGCGATTGACT
TGTTGAATCAGGTCGGTATTCCCGATCCGGCTTCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATTGCGATGGCCATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATTGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCCGGTCAGGTGGTGGAAACGGGCGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCATCGTTGCCTGGCGTTGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCTTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404