Detailed information NTG0631601

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: LP088_RS10100
• Genome accession: NZ_CP087814
• Coordinates: 1975344..1976567 (+)
• Length: 407 a.a.
• NCBI ID: WP_264675928.1
• Uniprot ID: A0AAQ2T3C1
• Organism: Moraxella bovis strain SAM109238
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1970344..1981567

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LP088_RS10090 (LP088_10000)	-	1971539..1972861 (-)	1323	WP_264675926.1	leucine-rich repeat domain-containing protein	-
LP088_RS10095 (LP088_10005)	recG	1972904..1974997 (-)	2094	WP_264675927.1	ATP-dependent DNA helicase RecG	-
LP088_RS10100 (LP088_10010)	pilC	1975344..1976567 (+)	1224	WP_264675928.1	type II secretion system F family protein	Machinery gene
LP088_RS10105 (LP088_10015)	pilD	1976567..1977472 (+)	906	WP_112742507.1	prepilin peptidase	Machinery gene
LP088_RS10115 (LP088_10025)	glnD	1977716..1980493 (+)	2778	WP_264675929.1	[protein-PII] uridylyltransferase	-
LP088_RS10120 (LP088_10030)	-	1980551..1981399 (+)	849	WP_078273701.1	WG repeat-containing protein	-

Sequence

Protein

• Length: 407 a.a.
• Molecular weight: 44889.99 Da
• Isoelectric Point: 9.0694

>NTDB_id=631601 LP088_RS10100 WP_264675928.1 1975344..1976567(+) (pilC) [Moraxella bovis strain SAM109238]
MAKVATEQLIDFKYSGTNRRGQNVKGEMTSKSIELARAQLRKQGIIVQDIRQKPKPLFSMKKSIKAIDIAIFVRQLATMM
KAGVPLTQSFEIVADSLDNPSMKDLVLKVKADIESGSNFATALRKHPKYFDDLFCSLVESGEQSGALETMLERVATYKEK
SELLKAKIKKAMKYPIAVIVVAIIVTAILLIKVVPVFAEMFEGFGAELPAFTQMVVNMSNWMAKYYLVFFGALAIIIIAF
SQAKLHSKKFRDFLDKLTLKLPIFGDIAYKAIIARFCRTLSTTFAAGVPLIDALDSTAGATNNVVFYNATHQIKEDVATG
QQMQFAIRSTNLFPSMVVQMVGIGEEAGSLEEMLDKSATFYENEVDNAVDGLTSLMEPMIMAFLGVVIGGLVIAMYLPIF
MMGDVIG

Nucleotide

• Length: 1224 bp

>NTDB_id=631601 LP088_RS10100 WP_264675928.1 1975344..1976567(+) (pilC) [Moraxella bovis strain SAM109238]
ATGGCAAAAGTAGCAACTGAACAGTTAATTGATTTTAAATACTCGGGCACCAACCGACGTGGACAAAACGTCAAGGGTGA
GATGACCTCTAAGAGCATTGAACTTGCTCGTGCCCAACTACGCAAGCAGGGCATCATCGTTCAAGACATCCGCCAAAAGC
CCAAACCGTTATTTAGCATGAAGAAGTCAATTAAAGCCATTGATATTGCCATTTTTGTGCGTCAGCTTGCCACGATGATG
AAAGCCGGTGTACCACTAACACAGTCCTTTGAGATTGTCGCCGATTCACTTGACAATCCTAGCATGAAAGACTTAGTATT
AAAAGTTAAAGCTGACATTGAATCAGGGAGCAACTTTGCTACCGCCTTACGTAAGCACCCCAAATACTTTGATGACCTCT
TTTGTTCATTAGTCGAGTCAGGTGAGCAGTCAGGTGCGTTAGAGACCATGCTTGAACGTGTCGCCACCTATAAAGAGAAA
AGCGAGCTGTTAAAAGCAAAAATTAAAAAAGCGATGAAATATCCAATTGCAGTCATTGTAGTTGCCATCATTGTTACTGC
CATTTTGCTTATTAAGGTTGTCCCTGTTTTTGCTGAAATGTTTGAAGGTTTTGGAGCTGAACTGCCAGCATTCACTCAAA
TGGTAGTCAATATGTCAAACTGGATGGCAAAATACTATTTGGTTTTTTTTGGTGCATTGGCAATTATTATTATCGCATTT
AGCCAAGCAAAACTACACTCTAAAAAGTTTCGTGACTTTTTGGATAAACTGACCTTGAAGTTACCCATATTTGGTGACAT
TGCTTATAAAGCCATCATTGCTCGTTTTTGTCGCACTTTATCGACAACTTTTGCTGCCGGTGTACCTTTGATTGATGCTC
TAGACTCTACCGCAGGGGCAACCAATAACGTGGTCTTCTATAATGCCACTCATCAAATAAAAGAAGATGTCGCCACTGGT
CAGCAAATGCAGTTTGCCATCCGTAGCACCAATCTCTTTCCTAGCATGGTGGTACAGATGGTCGGTATTGGTGAAGAAGC
TGGTAGTCTAGAAGAGATGCTTGATAAATCCGCTACTTTTTATGAAAATGAAGTGGACAATGCTGTTGATGGCTTAACCA
GTTTGATGGAACCCATGATTATGGCATTTTTAGGCGTGGTTATTGGTGGTTTAGTCATCGCCATGTATCTACCAATCTTC
ATGATGGGCGATGTTATCGGATGA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein F (T2SSF) (72-195)

• Type II secretion system (T2SS), protein F (T2SSF) (276-398)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Acinetobacter baumannii D1279779	66.176	100	0.663
pilC	Acinetobacter baylyi ADP1	62.99	100	0.631
pilC	Pseudomonas stutzeri DSM 10701	61.772	97.052	0.6
pilC	Legionella pneumophila strain ERS1305867	55.138	98.034	0.541
pilG	Neisseria meningitidis 44/76-A	46.875	94.349	0.442
pilG	Neisseria gonorrhoeae MS11	46.875	94.349	0.442
pilC	Vibrio cholerae strain A1552	43.137	100	0.432
pilC	Vibrio campbellii strain DS40M4	39.901	99.754	0.398