Detailed information NTG0624750

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: LMK00_RS05895
• Genome accession: NZ_CP086395
• Coordinates: 1216664..1217515 (+)
• Length: 283 a.a.
• NCBI ID: WP_252175011.1
• Uniprot ID: A0A9Q8XZZ6
• Organism: Lactococcus formosensis strain I4/6O
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1211664..1222515

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LMK00_RS05875 (LMK00_05875)	-	1211990..1212610 (+)	621	WP_019291676.1	GntR family transcriptional regulator	-
LMK00_RS05880 (LMK00_05880)	-	1212815..1214017 (+)	1203	WP_017370393.1	glycine betaine/L-proline ABC transporter ATP-binding protein	-
LMK00_RS05885 (LMK00_05885)	-	1214010..1215734 (+)	1725	WP_252175009.1	ABC transporter permease/substrate binding protein	-
LMK00_RS05890 (LMK00_05890)	budA	1215876..1216574 (+)	699	WP_252175010.1	acetolactate decarboxylase	-
LMK00_RS05895 (LMK00_05895)	dprA	1216664..1217515 (+)	852	WP_252175011.1	DNA-processing protein DprA	Machinery gene
LMK00_RS05900 (LMK00_05900)	topA	1217722..1219872 (+)	2151	WP_165711717.1	type I DNA topoisomerase	-
LMK00_RS05905 (LMK00_05905)	trmFO	1219918..1221261 (+)	1344	WP_252175012.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
LMK00_RS05910 (LMK00_05910)	-	1221335..1221556 (-)	222	WP_252175013.1	hypothetical protein	-

Sequence

Protein

• Length: 283 a.a.
• Molecular weight: 32120.30 Da
• Isoelectric Point: 9.9870

>NTDB_id=624750 LMK00_RS05895 WP_252175011.1 1216664..1217515(+) (dprA) [Lactococcus formosensis strain I4/6O]
MIKNFEILRLKKAGMSNLGILKLINYQERHEVKLTLRQFARIAEIKAIPNFIENYKSQDVKRLRKLYKLFPSFSILDDIY
PEWLKEIYNPPALLFYQGNLKLLNLPKLGFVGSRESSKEATKITHKLIEELKQNFVIVSGLARGVDTSSHVAAVKQKTPT
IAVIGNGLDISYPKENRKLQEYLATHELVLSEYLAGEQPLKFHFPERNRIIAGLSRGIVVVEAKQRSGSLITSRYALEGN
REVFAVPGDILNRNVSGCNQLIQQGAAKLVTHGQDILDEFYLD

Nucleotide

• Length: 852 bp

>NTDB_id=624750 LMK00_RS05895 WP_252175011.1 1216664..1217515(+) (dprA) [Lactococcus formosensis strain I4/6O]
ATGATTAAAAACTTTGAAATATTACGTTTGAAAAAAGCAGGAATGTCCAACCTTGGAATTTTGAAACTGATTAACTATCA
GGAAAGGCATGAAGTAAAGCTTACTTTACGACAATTTGCACGGATTGCAGAGATTAAAGCTATCCCAAATTTTATTGAGA
ATTATAAGAGTCAGGATGTTAAACGGCTACGAAAGCTATATAAGCTCTTCCCTTCGTTCTCCATTTTAGATGATATTTAT
CCAGAATGGTTAAAAGAAATATATAATCCTCCGGCACTCCTTTTTTACCAAGGAAATCTAAAATTACTTAATCTACCTAA
ACTTGGATTTGTAGGTAGCCGTGAAAGCTCCAAAGAAGCAACCAAAATTACGCATAAGCTTATTGAGGAATTAAAACAAA
ACTTTGTTATTGTGAGCGGATTAGCACGCGGTGTTGACACTTCTAGCCATGTAGCAGCTGTAAAGCAAAAAACTCCAACT
ATTGCTGTCATAGGTAATGGCTTAGATATTTCTTATCCAAAAGAAAATCGTAAATTACAAGAATATTTAGCAACACACGA
ATTAGTTTTATCAGAGTACCTTGCAGGAGAGCAACCGCTCAAGTTTCATTTCCCAGAGAGGAATAGAATCATTGCTGGTC
TTTCACGTGGGATTGTCGTTGTTGAAGCAAAACAACGTAGTGGAAGTCTCATTACAAGTCGATATGCATTAGAAGGGAAT
AGAGAGGTATTCGCTGTACCTGGAGATATTTTGAATCGAAATGTCTCAGGCTGTAATCAATTAATTCAACAGGGAGCTGC
TAAGCTTGTCACACACGGTCAAGATATTTTAGATGAATTTTATTTAGATTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (75-271)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (2-63)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Lactococcus lactis subsp. cremoris KW2	63.929	98.94	0.633
dprA	Streptococcus mutans UA159	56.631	98.587	0.558
dprA/cilB/dalA	Streptococcus pneumoniae D39	55.197	98.587	0.544
dprA/cilB/dalA	Streptococcus pneumoniae R6	55.197	98.587	0.544
dprA/cilB/dalA	Streptococcus mitis SK321	55.197	98.587	0.544
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	55.197	98.587	0.544
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	55.197	98.587	0.544
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	54.48	98.587	0.537
dprA	Haemophilus influenzae Rd KW20	39.781	96.82	0.385
dprA	Latilactobacillus sakei subsp. sakei 23K	37.153	100	0.378
dprA	Staphylococcus aureus N315	39.313	92.58	0.364