Detailed information NTG0622379

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: LL045_RS06180
• Genome accession: NZ_CP086083
• Coordinates: 1266967..1267815 (+)
• Length: 282 a.a.
• NCBI ID: WP_038600928.1
• Uniprot ID: -
• Organism: Lactococcus lactis subsp. lactis strain EIP20A
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1261967..1272815

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LL045_RS06155 (LL045_06140)	ilvN	1262725..1263201 (+)	477	WP_010905839.1	acetolactate synthase small subunit	-
LL045_RS06160 (LL045_06145)	ilvC	1263246..1264268 (+)	1023	WP_038600939.1	ketol-acid reductoisomerase	-
LL045_RS06165 (LL045_06150)	ilvA	1264324..1265574 (+)	1251	WP_038600936.1	threonine ammonia-lyase IlvA	-
LL045_RS06170 (LL045_06155)	budA	1265690..1266400 (+)	711	WP_038600933.1	acetolactate decarboxylase	-
LL045_RS06175 (LL045_06160)	-	1266441..1266821 (+)	381	WP_038600930.1	RidA family protein	-
LL045_RS06180 (LL045_06165)	dprA	1266967..1267815 (+)	849	WP_038600928.1	DNA-processing protein DprA	Machinery gene
LL045_RS06185 (LL045_06170)	topA	1268077..1270215 (+)	2139	WP_098393837.1	type I DNA topoisomerase	-
LL045_RS06190 (LL045_06175)	trmFO	1270287..1271630 (+)	1344	WP_098393836.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
LL045_RS06195 (LL045_06180)	xerS	1271675..1272745 (-)	1071	WP_098393835.1	tyrosine recombinase XerS	-

Sequence

Protein

• Length: 282 a.a.
• Molecular weight: 32158.24 Da
• Isoelectric Point: 9.2209

>NTDB_id=622379 LL045_RS06180 WP_038600928.1 1266967..1267815(+) (dprA) [Lactococcus lactis subsp. lactis strain EIP20A]
MITNFDLYRWKKAGMTNLEVNKLLKFFHRYDKKISLRQMGQVAQLKSIPNFIEQYKNQDVIKLREEYKIYPSFSLLDEIY
PERLKEIYNPPVLLFYQGDISLLKTPKLAFVGSRQASSQGIKAVQKIVTELNQNFTIVSGLAKGIDTASHLSAIKNKIPT
IAVIGTGLDIFYPLENRKIQEYLAKNQLILSEYPVGEKPLRYHFPERNRIIAGLSHGVVVIEAKLRSGSLITCERALEEG
RDIFAVPGNIADGFSDGCNHLIQQGAKLIYQAQDILEEYLYD

Nucleotide

• Length: 849 bp

>NTDB_id=622379 LL045_RS06180 WP_038600928.1 1266967..1267815(+) (dprA) [Lactococcus lactis subsp. lactis strain EIP20A]
ATGATAACAAATTTTGATTTATATCGTTGGAAAAAAGCTGGCATGACCAATTTAGAAGTAAATAAACTTTTAAAATTTTT
TCATAGATATGATAAAAAAATAAGTTTAAGACAAATGGGACAAGTAGCACAACTTAAATCTATTCCCAACTTTATTGAAC
AATATAAAAATCAAGACGTAATTAAACTGAGAGAAGAGTATAAAATATACCCATCATTTTCTCTTCTGGATGAAATTTAT
CCCGAAAGGCTCAAAGAAATTTACAATCCACCGGTTCTATTATTTTATCAAGGAGATATAAGTCTCTTAAAAACTCCTAA
ATTAGCTTTTGTTGGTAGTCGACAAGCAAGCTCGCAAGGAATTAAAGCCGTCCAAAAAATTGTGACAGAGTTGAACCAAA
ATTTTACGATTGTCAGCGGACTCGCTAAAGGAATTGATACAGCAAGTCATCTTTCTGCCATTAAAAATAAAATCCCTACA
ATTGCAGTTATCGGTACAGGCTTAGATATCTTTTATCCTTTAGAAAATCGAAAAATTCAAGAGTATCTTGCTAAAAACCA
ACTAATTCTATCAGAATATCCAGTCGGAGAAAAGCCACTTCGCTATCATTTTCCTGAACGTAATCGCATCATTGCGGGAC
TTTCACATGGAGTAGTGGTGATAGAAGCAAAGTTACGAAGCGGTAGTTTAATTACTTGTGAGCGCGCTCTGGAAGAAGGA
AGAGACATTTTCGCTGTACCAGGAAACATAGCAGATGGATTTTCAGATGGCTGTAATCATCTAATTCAACAAGGAGCAAA
ATTAATTTATCAAGCCCAAGATATCTTAGAAGAATATTTGTATGATTAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (2-63)

• DNA recombination-mediator protein A (DNA_processg_A) (76-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Lactococcus lactis subsp. cremoris KW2	86.17	100	0.862
dprA	Streptococcus mutans UA159	60.072	98.582	0.592
dprA/cilB/dalA	Streptococcus mitis SK321	54.643	99.291	0.543
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	53.929	99.291	0.535
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	53.929	99.291	0.535
dprA/cilB/dalA	Streptococcus pneumoniae R6	53.929	99.291	0.535
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	53.929	99.291	0.535
dprA/cilB/dalA	Streptococcus pneumoniae D39	53.929	99.291	0.535
dprA	Haemophilus influenzae Rd KW20	38.889	95.745	0.372
dprA	Latilactobacillus sakei subsp. sakei 23K	38.519	95.745	0.369
dprA	Acinetobacter baylyi ADP1	37.681	97.872	0.369