Detailed information NTG0616972

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: JIX55_RS47055
• Genome accession: NZ_CP102513
• Coordinates: 10780584..10781240 (-)
• Length: 218 a.a.
• NCBI ID: WP_257561766.1
• Uniprot ID: -
• Organism: Streptomyces sp. DSM 40750
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 10775584..10786240

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JIX55_RS47030 (JIX55_47030)	-	10776531..10777742 (-)	1212	WP_257561770.1	C45 family peptidase	-
JIX55_RS47035 (JIX55_47035)	-	10777869..10778774 (+)	906	WP_257561769.1	MurR/RpiR family transcriptional regulator	-
JIX55_RS47040 (JIX55_47040)	-	10778827..10779417 (+)	591	WP_257561768.1	DinB family protein	-
JIX55_RS47045 (JIX55_47045)	-	10779499..10779873 (+)	375	WP_306819979.1	helix-turn-helix transcriptional regulator	-
JIX55_RS47050 (JIX55_47050)	clpP	10779982..10780584 (-)	603	WP_257561767.1	ATP-dependent Clp protease proteolytic subunit	Regulator
JIX55_RS47055 (JIX55_47055)	clpP	10780584..10781240 (-)	657	WP_257561766.1	ATP-dependent Clp protease proteolytic subunit	Regulator
JIX55_RS47060 (JIX55_47060)	-	10781460..10781939 (+)	480	WP_257561765.1	VOC family protein	-
JIX55_RS47065 (JIX55_47065)	-	10782099..10783097 (+)	999	WP_257561764.1	TerC family protein	-
JIX55_RS47070 (JIX55_47070)	-	10783094..10783453 (-)	360	WP_257561763.1	DUF6193 family natural product biosynthesis protein	-
JIX55_RS47075 (JIX55_47075)	-	10783531..10784451 (-)	921	WP_257561762.1	SGNH/GDSL hydrolase family protein	-
JIX55_RS47080 (JIX55_47080)	-	10784574..10785251 (-)	678	WP_257561761.1	DUF3105 domain-containing protein	-
JIX55_RS47085 (JIX55_47085)	-	10785339..10785758 (-)	420	WP_257561760.1	DUF6153 family protein	-

Sequence

Protein

• Length: 218 a.a.
• Molecular weight: 23743.88 Da
• Isoelectric Point: 4.8005

>NTDB_id=616972 JIX55_RS47055 WP_257561766.1 10780584..10781240(-) (clpP) [Streptomyces sp. DSM 40750]
MAPLITGWAPTLAPRAEEGDTPPSRFDDHLAAQLLAQRIVFLGTQVDEVSANRVCAQLLVLSAEDPRTDISLYINSPGGS
VTAGLAIYDTMRLIPNDVATLAMGFAASMGQFLLSVGTRGKRFALPNARIMMHQPSAGIGGTTADIEIQAENLEFTKRAI
ERITAEHTGQSEETISRDGDRDRWFTAEQAKEYGMVDRVVESLDDVRPAATRRRMGLQ

Nucleotide

• Length: 657 bp

>NTDB_id=616972 JIX55_RS47055 WP_257561766.1 10780584..10781240(-) (clpP) [Streptomyces sp. DSM 40750]
GTGGCTCCACTGATCACCGGCTGGGCGCCGACGCTCGCCCCGCGTGCCGAGGAGGGTGACACCCCGCCGTCACGCTTCGA
CGACCATCTCGCCGCGCAGCTGCTCGCGCAGCGGATCGTCTTCCTCGGCACCCAGGTCGACGAGGTCTCCGCGAACCGGG
TCTGCGCGCAGCTGCTGGTGCTGTCGGCGGAGGACCCGCGCACCGACATCAGTCTGTACATCAACAGCCCGGGCGGTTCG
GTGACCGCGGGTCTCGCCATCTACGACACGATGCGGCTGATCCCGAACGACGTGGCGACGCTGGCGATGGGTTTCGCGGC
GAGCATGGGCCAGTTCCTGCTGAGCGTGGGCACGCGCGGGAAGCGGTTCGCGCTGCCCAACGCGCGGATCATGATGCACC
AGCCGTCGGCGGGCATCGGCGGCACCACCGCGGACATCGAGATCCAGGCGGAGAACCTGGAGTTCACCAAGAGGGCCATC
GAGCGGATCACCGCGGAGCACACCGGCCAGTCCGAGGAGACGATCTCCCGGGACGGCGACCGCGACCGCTGGTTCACGGC
CGAGCAGGCCAAGGAGTACGGGATGGTCGACCGGGTCGTCGAGTCGCTCGACGACGTACGGCCGGCCGCGACCCGCCGAC
GGATGGGGCTGCAGTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (30-201)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Lactococcus lactis subsp. cremoris KW2	45.596	88.532	0.404
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	45.078	88.532	0.399
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	50.581	78.899	0.399
clpP	Bacillus subtilis subsp. subtilis str. 168	48.876	81.651	0.399
clpP	Streptococcus pneumoniae TIGR4	48.555	79.358	0.385
clpP	Streptococcus pneumoniae Rx1	48.555	79.358	0.385
clpP	Streptococcus pneumoniae D39	48.555	79.358	0.385
clpP	Streptococcus pneumoniae R6	48.555	79.358	0.385
clpP	Streptococcus pyogenes MGAS315	47.429	80.275	0.381
clpP	Streptococcus pyogenes JRS4	47.429	80.275	0.381
clpP	Streptococcus thermophilus LMG 18311	46.821	79.358	0.372
clpP	Streptococcus thermophilus LMD-9	46.821	79.358	0.372
clpP	Streptococcus mutans UA159	45.714	80.275	0.367