Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA/celA/cilE   Type   Machinery gene
Locus tag   NQZ91_RS03455 Genome accession   NZ_CP102145
Coordinates   730548..731216 (-) Length   222 a.a.
NCBI ID   WP_257117868.1    Uniprot ID   -
Organism   Streptococcus suis strain DNS20     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 725548..736216
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ91_RS03440 (NQZ91_03440) - 725548..726834 (-) 1287 WP_257117865.1 poly(R)-hydroxyalkanoic acid synthase subunit PhaE -
  NQZ91_RS03445 (NQZ91_03445) - 727268..728224 (-) 957 WP_257117866.1 DNA/RNA non-specific endonuclease -
  NQZ91_RS03450 (NQZ91_03450) comEC/celB 728330..730561 (-) 2232 WP_257117867.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  NQZ91_RS03455 (NQZ91_03455) comEA/celA/cilE 730548..731216 (-) 669 WP_257117868.1 helix-hairpin-helix domain-containing protein Machinery gene
  NQZ91_RS03460 (NQZ91_03460) - 731289..732035 (-) 747 WP_170242640.1 1-acyl-sn-glycerol-3-phosphate acyltransferase -
  NQZ91_RS03465 (NQZ91_03465) tehB 732128..732988 (-) 861 WP_257118041.1 SAM-dependent methyltransferase TehB -
  NQZ91_RS03470 (NQZ91_03470) - 733140..734183 (+) 1044 WP_257117869.1 zinc-binding dehydrogenase -
  NQZ91_RS03475 (NQZ91_03475) - 734959..735711 (-) 753 WP_105122320.1 hypothetical protein -

Sequence

Protein


Download         Length: 222 a.a.        Molecular weight: 23426.97 Da        Isoelectric Point: 4.6117

>NTDB_id=615455 NQZ91_RS03455 WP_257117868.1 730548..731216(-) (comEA/celA/cilE) [Streptococcus suis strain DNS20]
MNNIHSYIEILKNYKWQIGLPAAAGVILTSFLLFSQPAKSVDQTGLADLTRTEQTSSASSEDQTKTASSSTEVSSQLVVD
VKGAVKNPGLYTLEHGSRVNDALLAAGGFSQEADQKSVNLAQKLSDEAVVYVASKGENISVVASSNPSSAMSQNQDDKQG
LVNLNTATEAELQTISGVGAKRAADIIAYREANGGFKSVDDLNNVSGIGDKTLENIRPYVTV

Nucleotide


Download         Length: 669 bp        

>NTDB_id=615455 NQZ91_RS03455 WP_257117868.1 730548..731216(-) (comEA/celA/cilE) [Streptococcus suis strain DNS20]
ATGAACAATATCCATTCTTATATCGAAATATTGAAAAACTATAAGTGGCAGATTGGTCTGCCGGCTGCGGCAGGGGTCAT
TTTGACCAGCTTTCTGCTCTTTAGCCAACCCGCCAAATCCGTTGACCAAACAGGTCTAGCTGACTTAACCAGGACAGAGC
AGACAAGCTCTGCATCATCTGAGGACCAAACGAAAACAGCATCTAGCTCAACTGAAGTGAGCAGCCAGTTGGTGGTCGAT
GTCAAGGGAGCGGTGAAAAATCCGGGGCTCTATACCCTTGAACATGGTAGCCGGGTCAACGATGCCTTGCTGGCTGCGGG
TGGATTTTCCCAGGAGGCAGATCAGAAGTCAGTCAATCTGGCTCAGAAGCTGAGCGACGAAGCGGTGGTCTATGTGGCTA
GTAAAGGTGAAAATATCTCGGTGGTGGCAAGCAGCAATCCCAGCTCTGCTATGTCCCAAAACCAAGACGACAAGCAAGGT
CTAGTTAATCTCAATACGGCGACCGAGGCGGAGCTGCAGACCATTTCAGGCGTCGGGGCCAAGCGGGCGGCGGACATTAT
CGCCTATCGGGAGGCCAATGGTGGCTTCAAGAGCGTCGACGACCTCAATAATGTGTCGGGTATCGGCGACAAGACCCTGG
AGAACATCCGGCCTTATGTCACGGTTTAA

Domains

Predicted by InterProScan.

Helix-hairpin-helix motif (HHH_3)

(159-221)

SLBB domain (SLBB)

(78-132)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA/celA/cilE Streptococcus pneumoniae TIGR4

45.701

99.55

0.455
  comEA/celA/cilE Streptococcus mitis SK321

45.455

99.099

0.45
  comEA/celA/cilE Streptococcus mitis NCTC 12261

45.249

99.55

0.45
  comEA/celA/cilE Streptococcus pneumoniae R6

44.545

99.099

0.441
  comEA/celA/cilE Streptococcus pneumoniae Rx1

44.545

99.099

0.441
  comEA/celA/cilE Streptococcus pneumoniae D39

44.545

99.099

0.441
  comEA Streptococcus thermophilus LMD-9

58.065

69.82

0.405
  comEA Bacillus subtilis subsp. subtilis str. 168

41.509

95.495

0.396
  comEA Lactococcus lactis subsp. cremoris KW2

36.036

100

0.36