Detailed information NTG0610504

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: LDO52_RS01380
• Genome accession: NZ_CP084300
• Coordinates: 299130..300188 (+)
• Length: 352 a.a.
• NCBI ID: WP_005168888.1
• Uniprot ID: N9KWF8
• Organism: Acinetobacter pseudolwoffii strain XMC5X702
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 294130..305188

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LDO52_RS01365 (LDO52_01365)	mraY	294396..295514 (+)	1119	WP_005094334.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-
LDO52_RS01370 (LDO52_01370)	-	295569..296372 (+)	804	WP_005094332.1	putative RNA methyltransferase	-
LDO52_RS01375 (LDO52_01375)	ponA	296436..298964 (-)	2529	WP_225553564.1	penicillin-binding protein PBP1a	-
LDO52_RS01380 (LDO52_01380)	pilM	299130..300188 (+)	1059	WP_005168888.1	pilus assembly protein PilM	Machinery gene
LDO52_RS01385 (LDO52_01385)	comN	300188..300826 (+)	639	WP_005094324.1	PilN domain-containing protein	Machinery gene
LDO52_RS01390 (LDO52_01390)	comO	300823..301536 (+)	714	WP_005094323.1	type 4a pilus biogenesis protein PilO	Machinery gene
LDO52_RS01395 (LDO52_01395)	pilP	301536..302063 (+)	528	WP_005094322.1	pilus assembly protein PilP	Machinery gene
LDO52_RS01400 (LDO52_01400)	pilQ	302125..304257 (+)	2133	WP_410553172.1	type IV pilus secretin PilQ	Machinery gene
LDO52_RS01405 (LDO52_01405)	aroK	304294..304830 (+)	537	WP_005094320.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39045.62 Da
• Isoelectric Point: 4.6364

>NTDB_id=610504 LDO52_RS01380 WP_005168888.1 299130..300188(+) (pilM) [Acinetobacter pseudolwoffii strain XMC5X702]
MRRLYRKPNKGLIGVDISSTSVKVLELSVKSSRYWVESYALVPLMENSVVEKNVLNPEAVADALGRAINLANTQSNHAAF
AIPTSMVITKTIEMDADMSNDEREVQIREDAEQYIPFPLDEASLDFEVLPDRLANPNRVNVLLVATRIENIEARSEVLEI
AGLTPKIADVESFALENAFKVFSDTLPMGVNTVGILDIGHSMTTLSVMQNNKIIYTREQVFGGKQLTQEIQNRYGLSFEE
AGRAKKTRALPDDYDIEVLEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQIDIKKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=610504 LDO52_RS01380 WP_005168888.1 299130..300188(+) (pilM) [Acinetobacter pseudolwoffii strain XMC5X702]
GTGCGCAGGTTATATCGTAAACCAAATAAGGGGTTAATAGGAGTTGATATTAGTTCGACTTCTGTTAAGGTTTTGGAGCT
TTCTGTAAAAAGTAGCCGTTACTGGGTAGAGAGCTATGCTTTGGTCCCATTAATGGAAAACAGTGTTGTTGAAAAAAACG
TCTTAAACCCGGAAGCAGTCGCGGATGCCCTTGGGCGTGCAATTAATTTGGCCAACACCCAGTCGAATCATGCCGCTTTT
GCCATTCCAACCTCTATGGTGATTACCAAAACTATCGAGATGGATGCAGACATGTCGAATGATGAGCGTGAAGTTCAGAT
TCGTGAAGATGCAGAACAGTATATTCCGTTCCCACTCGATGAAGCCAGTCTGGACTTTGAAGTTCTGCCTGACCGTCTTG
CCAATCCAAACCGGGTCAATGTGCTGTTGGTGGCAACCCGCATTGAAAATATTGAAGCACGCTCTGAAGTTTTGGAAATT
GCCGGACTGACACCCAAGATCGCGGATGTAGAAAGTTTTGCGCTGGAAAATGCTTTTAAAGTGTTTTCGGATACTTTGCC
GATGGGGGTAAATACTGTCGGTATTTTAGACATTGGTCATAGTATGACCACCTTGTCTGTCATGCAGAACAACAAAATTA
TTTATACCCGTGAGCAGGTGTTCGGTGGCAAACAGCTGACTCAGGAAATTCAGAACCGTTATGGTCTGTCTTTTGAAGAA
GCCGGGCGTGCTAAAAAAACCCGTGCTTTGCCAGATGACTATGATATTGAAGTGCTAGAACCGTTTCTGGATGCCGTGGT
GCAACAGGCAGCGCGGTCATTACAATTCTTCTTTTCATCGTCTCAGTTTAATGAGATTGATCATATTTTATTGGCCGGCG
GGAATGCCAATATTCCAGGTCTGGCAAAATTATTACAACAAAAACTCGGTTACCGTGTCACGATCGCGAATCCATTTTTG
CAAATGGGCTTTTCTCCTCAAATTGATATTAAAAAAATTGAAAATGACGCGTCATCACTCATGGTTGCATGTGGTTTGGC
ATTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9KWF8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	85.511	100	0.855
comM	Acinetobacter nosocomialis M2	84.943	100	0.849
comM	Acinetobacter baylyi ADP1	79.545	100	0.795
pilM	Legionella pneumophila strain ERS1305867	39.776	100	0.403