Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   EL269_RS06525 Genome accession   NZ_AP018935
Coordinates   1231462..1231944 (-) Length   160 a.a.
NCBI ID   WP_000163516.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain HU-GS5823     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1226462..1236944
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL269_RS06505 (SAGS_1238) alsS 1226721..1228403 (-) 1683 WP_000140348.1 acetolactate synthase AlsS -
  EL269_RS06510 (SAGS_1239) - 1228513..1229739 (-) 1227 WP_057486694.1 tetratricopeptide repeat protein -
  EL269_RS06515 (SAGS_1240) - 1229729..1230919 (-) 1191 WP_001081539.1 AI-2E family transporter -
  EL269_RS06520 (SAGS_1241) - 1231011..1231472 (-) 462 WP_000796045.1 NUDIX hydrolase -
  EL269_RS06525 (SAGS_1242) mutX 1231462..1231944 (-) 483 WP_000163516.1 NUDIX hydrolase Machinery gene
  EL269_RS06530 (SAGS_1243) - 1232161..1233474 (+) 1314 WP_000403407.1 hypothetical protein -
  EL269_RS06535 (SAGS_1244) - 1233520..1234653 (+) 1134 WP_000564846.1 ISAs1-like element IS1548 family transposase -
  EL269_RS06540 (SAGS_1245) hylB 1234738..1236705 (+) 1968 Protein_1180 hyaluronate lyase -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18863.27 Da        Isoelectric Point: 4.4433

>NTDB_id=60899 EL269_RS06525 WP_000163516.1 1231462..1231944(-) (mutX) [Streptococcus agalactiae strain HU-GS5823]
MTKLATICYIDNGKELLLLYRNKKENDVHEGKWISVGGKLEAGETPDECAKREILEETHLTVKKMDFKGVITFPEFTPGH
DWYTYVFKVTDYEGELISDDESREGTLEWVPYDQVLSKPTWQGDYEIFKWILEDVPFFSAKFVYDEHQNLIEKTVNFYEK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=60899 EL269_RS06525 WP_000163516.1 1231462..1231944(-) (mutX) [Streptococcus agalactiae strain HU-GS5823]
ATGACTAAATTAGCAACAATTTGTTACATTGACAATGGCAAGGAATTACTTCTATTGTACCGCAACAAAAAAGAGAATGA
TGTTCATGAGGGAAAGTGGATCTCGGTAGGCGGTAAACTGGAGGCAGGTGAAACTCCGGATGAATGTGCTAAGCGTGAAA
TTCTAGAAGAAACCCATTTAACAGTAAAAAAAATGGATTTTAAAGGAGTCATCACTTTTCCTGAATTTACGCCAGGTCAT
GATTGGTATACCTATGTCTTTAAAGTAACAGATTATGAAGGAGAGTTAATTTCAGATGATGAATCACGAGAAGGAACCTT
AGAATGGGTACCATATGATCAAGTTCTCTCTAAGCCAACGTGGCAAGGAGATTACGAAATTTTTAAATGGATTTTAGAAG
ATGTTCCTTTCTTTTCTGCTAAGTTTGTTTATGATGAACACCAAAATTTAATTGAAAAGACGGTTAATTTTTATGAAAAA
TAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706

Multiple sequence alignment