Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilQ   Type   Machinery gene
Locus tag   K8O89_RS14895 Genome accession   NZ_CP082852
Coordinates   3330974..3333079 (+) Length   701 a.a.
NCBI ID   WP_058388524.1    Uniprot ID   A0AAX0WV94
Organism   Legionella anisa strain FDAARGOS_1480     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3325974..3338079
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K8O89_RS14870 (K8O89_14840) - 3326848..3327966 (-) 1119 WP_019233705.1 hypothetical protein -
  K8O89_RS14875 (K8O89_14845) pilM 3328211..3329275 (+) 1065 WP_040522622.1 pilus assembly protein PilM Machinery gene
  K8O89_RS14880 (K8O89_14850) pilN 3329282..3329857 (+) 576 WP_019233703.1 PilN domain-containing protein Machinery gene
  K8O89_RS14885 (K8O89_14855) pilO 3329854..3330453 (+) 600 WP_019233702.1 type 4a pilus biogenesis protein PilO Machinery gene
  K8O89_RS14890 (K8O89_14860) pilP 3330450..3330965 (+) 516 WP_019233701.1 pilus assembly protein PilP Machinery gene
  K8O89_RS14895 (K8O89_14865) pilQ 3330974..3333079 (+) 2106 WP_058388524.1 type IV pilus secretin PilQ Machinery gene
  K8O89_RS14900 (K8O89_14870) aroK 3333347..3333874 (+) 528 WP_019233700.1 shikimate kinase AroK -
  K8O89_RS14905 (K8O89_14875) aroB 3333861..3334991 (+) 1131 WP_019233699.1 3-dehydroquinate synthase -
  K8O89_RS14910 (K8O89_14880) - 3334966..3336432 (+) 1467 WP_019233698.1 SPOR domain-containing protein -
  K8O89_RS14915 (K8O89_14885) proC 3336551..3337387 (-) 837 WP_019233697.1 pyrroline-5-carboxylate reductase -

Sequence

Protein


Download         Length: 701 a.a.        Molecular weight: 77284.64 Da        Isoelectric Point: 10.0167

>NTDB_id=603060 K8O89_RS14895 WP_058388524.1 3330974..3333079(+) (pilQ) [Legionella anisa strain FDAARGOS_1480]
MRRIVALFILISMSLGMAFAQNNPLISVKVIPLPLGKLRIDFEFAQPIKRDPASFVTPSPARIVLDFIDSNLELPSKQRT
KEIKLGSLDKYTIVAVGPRVRAILDLNYQVPFLGSISGNVYTLILNGKSNEVIQPPEALIITHRPARTSYEISHFDFRGI
DRQGGRAIVDVSSTSVPIEVEEHGKDILVKFLNTKVPQNLRKRFDVSDFRSPVQIVTFKQKGKNAHMLLAGTGAFGQYVY
QVNKQFMVDVFPLTPEEAQQAKLKKKVFSGRRLSLNFQNISIRAVLQLLADFTGINIVVSDKVQGNITLRLNNIPWDQAL
DIILTTQGLAKRQTGNVMLIDYKASFDKMEAEELKTQRAIQKLEPIRSELIQINYAKATDLAILIKDKQNSLLSDKGRVS
VDERTNTLWIQDSGTRINEVRDLIKQLDVPVKQVLIEARIVEVTKDFAQDLGIRWGVSRPTHLSGTLAGANQLAQGVAPA
NVVPLTDRLNLDLVAAPVTGVPPASVGIALAQLGDNILLDLELSALESEGLAELISSPKLITANQQAAVIESGQEIPYQE
ATSSGATAVAFKKAVLSLNVTPQITPDSKILMDLKINQDNALPNLTFNGVPVIATKEIRTNVLVSNGQTIVLGGIYQQDK
SKTITRVPFFGQLPVVGNLFKNTQIALRNDELLIFITPKIITNSLSITTIEGRKPIRFDEK

Nucleotide


Download         Length: 2106 bp        

>NTDB_id=603060 K8O89_RS14895 WP_058388524.1 3330974..3333079(+) (pilQ) [Legionella anisa strain FDAARGOS_1480]
GTGCGGAGAATTGTTGCTTTATTTATTTTAATTAGTATGAGCTTAGGGATGGCTTTTGCCCAGAATAATCCATTGATATC
AGTCAAGGTAATTCCTTTACCACTGGGGAAGTTGCGTATAGATTTTGAGTTTGCGCAACCTATAAAACGAGACCCTGCAA
GCTTTGTTACTCCAAGCCCGGCACGTATAGTCCTTGATTTTATTGACTCTAATCTGGAATTACCCTCCAAGCAAAGAACA
AAAGAAATTAAATTAGGTTCTCTTGATAAATATACTATTGTAGCAGTAGGCCCCCGTGTTCGGGCTATATTGGATTTAAA
TTATCAAGTGCCTTTTTTAGGCTCAATTTCTGGAAATGTATATACTCTTATTTTGAATGGCAAAAGTAATGAGGTAATCC
AACCTCCTGAAGCACTTATAATCACCCATCGTCCAGCTAGGACAAGTTATGAAATCAGTCATTTTGATTTTCGAGGAATT
GATCGGCAAGGCGGCCGGGCAATAGTGGATGTTTCCAGCACCAGCGTCCCGATTGAAGTAGAAGAGCATGGTAAAGATAT
TTTAGTTAAATTTTTAAACACGAAAGTTCCTCAGAACTTAAGGAAACGTTTTGATGTTTCGGATTTCCGCAGCCCTGTAC
AAATCGTTACTTTTAAACAAAAAGGTAAAAATGCACATATGTTATTAGCGGGTACAGGCGCTTTTGGCCAGTATGTTTAT
CAGGTTAATAAGCAATTCATGGTTGATGTATTTCCTTTGACTCCAGAAGAGGCACAACAGGCTAAATTGAAAAAGAAGGT
TTTCTCTGGAAGAAGACTTTCTTTAAATTTCCAAAACATCAGTATACGTGCTGTATTACAGTTGCTGGCTGATTTTACTG
GTATCAATATTGTAGTGAGTGATAAAGTTCAGGGTAATATTACTCTTAGGTTAAATAATATTCCCTGGGATCAAGCTTTG
GATATTATTTTAACGACACAAGGTTTGGCGAAGCGTCAGACAGGGAACGTGATGTTGATCGATTATAAAGCTTCTTTTGA
TAAAATGGAGGCAGAAGAGCTTAAGACCCAACGCGCTATACAAAAGCTTGAACCGATACGTTCAGAACTCATTCAAATTA
ATTATGCCAAAGCCACAGATCTTGCGATTTTGATTAAAGACAAACAAAATTCTCTTCTCTCGGACAAAGGTCGAGTAAGT
GTTGATGAGCGAACAAATACCCTTTGGATCCAAGACAGTGGAACTCGGATAAATGAAGTCAGGGATTTAATTAAACAGTT
GGATGTACCTGTCAAACAAGTACTTATAGAGGCACGTATTGTTGAAGTGACCAAGGATTTTGCTCAAGATCTTGGTATTC
GATGGGGTGTTTCCAGGCCGACTCATTTAAGTGGTACATTGGCTGGCGCCAATCAGCTGGCACAAGGAGTTGCTCCGGCA
AATGTCGTGCCATTAACAGACCGATTAAATCTGGATTTAGTTGCTGCTCCGGTGACGGGTGTACCTCCTGCTTCTGTAGG
TATCGCATTAGCGCAGCTTGGTGATAATATTTTACTTGATCTTGAATTGTCTGCTTTAGAAAGCGAGGGACTTGCCGAAT
TGATATCGAGTCCGAAGCTTATTACAGCAAATCAACAGGCTGCTGTAATTGAATCAGGACAGGAAATTCCCTATCAGGAA
GCTACTTCAAGCGGCGCGACCGCAGTAGCATTCAAAAAAGCGGTATTAAGTTTAAATGTAACCCCACAAATTACTCCTGA
TAGTAAGATACTTATGGATCTGAAAATTAATCAGGATAACGCATTACCTAATCTGACATTTAATGGAGTACCAGTAATTG
CAACTAAAGAAATTAGGACGAATGTACTTGTCAGCAATGGACAAACTATAGTACTTGGCGGTATTTATCAGCAAGATAAG
AGCAAGACTATTACCAGAGTACCTTTTTTTGGTCAGTTACCGGTAGTTGGGAATTTATTTAAAAATACACAAATTGCCCT
TAGAAATGATGAGCTGCTCATTTTTATAACACCAAAAATAATAACAAACTCATTGTCGATTACGACAATTGAAGGAAGAA
AACCAATTCGTTTTGATGAAAAATAA

Domains

Predicted by InterproScan.

Bacterial type II and III secretion system protein (Secretin)

(525-681)

Secretin and TonB N terminus short domain (STN)

(295-340)

Bacterial type II/III secretion system short domain (Secretin_N)

(369-433)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilQ Legionella pneumophila strain Lp02

72.334

99.001

0.716
  pilQ Legionella pneumophila strain ERS1305867

72.485

96.434

0.699
  comQ Acinetobacter baylyi ADP1

35.014

100

0.367
  pilQ Acinetobacter baumannii D1279779

34.14

100

0.362
  pilQ Acinetobacter baumannii strain A118

34.14

100

0.362
  pilQ Pseudomonas aeruginosa PAK

36.599

99.001

0.362