Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilZ   Type   Machinery gene
Locus tag   K8P08_RS11385 Genome accession   NZ_CP082847
Coordinates   2546766..2547107 (-) Length   113 a.a.
NCBI ID   WP_010947130.1    Uniprot ID   Q5ZVN9
Organism   Legionella pneumophila strain FDAARGOS_1483     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2541766..2552107
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K8P08_RS11365 (K8P08_11410) - 2542006..2543286 (+) 1281 WP_010947134.1 MFS transporter -
  K8P08_RS11370 (K8P08_11415) - 2543362..2544654 (-) 1293 WP_010947133.1 MFS transporter -
  K8P08_RS11375 (K8P08_11420) - 2544710..2545810 (-) 1101 WP_010947132.1 anhydro-N-acetylmuramic acid kinase -
  K8P08_RS11380 (K8P08_11425) - 2545922..2546710 (-) 789 WP_015444530.1 TatD family hydrolase -
  K8P08_RS11385 (K8P08_11430) pilZ 2546766..2547107 (-) 342 WP_010947130.1 PilZ domain-containing protein Machinery gene
  K8P08_RS11390 (K8P08_11435) - 2547234..2548139 (-) 906 WP_010947129.1 DNA polymerase III subunit delta' -
  K8P08_RS11395 (K8P08_11440) tmk 2548136..2548774 (-) 639 WP_010947128.1 dTMP kinase -
  K8P08_RS11400 (K8P08_11445) mltG 2548774..2549772 (-) 999 WP_010947127.1 endolytic transglycosylase MltG -
  K8P08_RS11405 (K8P08_11450) fabF 2549773..2551011 (-) 1239 WP_010947126.1 beta-ketoacyl-ACP synthase II -
  K8P08_RS11410 (K8P08_11455) acpP 2551031..2551279 (-) 249 WP_003631752.1 acyl carrier protein -

Sequence

Protein


Download         Length: 113 a.a.        Molecular weight: 12521.54 Da        Isoelectric Point: 8.2421

>NTDB_id=602947 K8P08_RS11385 WP_010947130.1 2546766..2547107(-) (pilZ) [Legionella pneumophila strain FDAARGOS_1483]
MTEKPQIINCSFPNEASLYMAYMPFVKGGGLFIRTQHVYSLGQSLELSVKLLNENEPYLVTGKIVWITPKGAQGNKPPGV
GIQFTGENSRYLCNKIETYLAGMLKSCQVTDTI

Nucleotide


Download         Length: 342 bp        

>NTDB_id=602947 K8P08_RS11385 WP_010947130.1 2546766..2547107(-) (pilZ) [Legionella pneumophila strain FDAARGOS_1483]
ATGACCGAAAAACCACAGATTATAAACTGCTCATTTCCCAATGAAGCATCTTTGTACATGGCTTACATGCCTTTTGTGAA
AGGTGGCGGTCTTTTTATAAGAACTCAACACGTTTATTCTCTAGGGCAGTCGCTTGAATTATCTGTTAAATTGCTCAATG
AAAATGAACCATATTTGGTCACTGGTAAAATAGTCTGGATTACTCCTAAAGGTGCACAAGGTAATAAGCCGCCGGGAGTT
GGTATTCAATTTACCGGTGAAAACAGTCGTTATCTATGTAACAAGATAGAAACTTATTTGGCAGGAATGCTAAAATCATG
TCAGGTTACAGATACTATATAG

Domains

Predicted by InterproScan.

PilZ domain (PilZ)

(10-101)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5ZVN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

99.115

100

0.991
  pilZ Legionella pneumophila strain ERS1305867

99.115

100

0.991