Detailed information    

insolico Bioinformatically predicted

Overview

Name   recP/tkt   Type   Machinery gene
Locus tag   M9H69_RS01245 Genome accession   NZ_CP097843
Coordinates   221134..223110 (+) Length   658 a.a.
NCBI ID   WP_250315704.1    Uniprot ID   -
Organism   Streptococcus oralis strain HP01     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 216134..228110
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M9H69_RS01220 (M9H69_01220) - 216823..218013 (+) 1191 WP_250315700.1 acetate kinase -
  M9H69_RS01225 (M9H69_01225) rnpA 218162..218533 (+) 372 WP_000748120.1 ribonuclease P protein component -
  M9H69_RS01230 (M9H69_01230) - 218508..219335 (+) 828 WP_250315701.1 membrane protein insertase YidC -
  M9H69_RS01235 (M9H69_01235) jag 219350..220336 (+) 987 WP_250315702.1 RNA-binding cell elongation regulator Jag/EloR -
  M9H69_RS01240 (M9H69_01240) - 220392..221015 (+) 624 WP_250315703.1 ribonuclease P -
  M9H69_RS01245 (M9H69_01245) recP/tkt 221134..223110 (+) 1977 WP_250315704.1 transketolase Machinery gene
  M9H69_RS01250 (M9H69_01250) yajC 223229..223549 (+) 321 WP_001069056.1 preprotein translocase subunit YajC -
  M9H69_RS01255 (M9H69_01255) - 223597..224040 (+) 444 WP_250315705.1 low molecular weight protein-tyrosine-phosphatase -
  M9H69_RS01260 (M9H69_01260) - 224027..224437 (+) 411 WP_250315706.1 MORN repeat-containing protein -
  M9H69_RS01265 (M9H69_01265) adhE 224736..227387 (+) 2652 WP_250315707.1 bifunctional acetaldehyde-CoA/alcohol dehydrogenase -

Sequence

Protein


Download         Length: 658 a.a.        Molecular weight: 71029.75 Da        Isoelectric Point: 4.8867

>NTDB_id=596570 M9H69_RS01245 WP_250315704.1 221134..223110(+) (recP/tkt) [Streptococcus oralis strain HP01]
MSNLSVNAIRFLGIDAINKANSGHPGVVMGAAPMAYSLFTKQLRINPAQPNWINRDRFILSAGHGSMLLYALLHLSGFED
VSMDEVKNFRQWGSKTPGHPEFGHTAGVDATTGPLGQGISTATGFAQAERFLAAKYNREGFNIFDHYTYVICGDGDLMEG
VSSEAASYAGLQKLDKLVVLYDSNDINLDGETKDSFTESVRDRYNAYGWHTALVEDGTDLEAIHAAIETAKASGKPSLIE
VKTVIGYGSPNKQGTNAVHGAPLGADETAATRQALGWDYEPFEIPEQVYADFKENVADRGASAYQAWTKLVADYKEAHPE
LAAEVEAIIDGRDPVKVTPADFPALENGFSQATRNSSQDALNVVAAKLPTFLGGSADLAHSNMTYIKTDGLQDDANRLNR
NIQFGVREFAMGTILNGMALHGGLRVYGGTFFVFSDYVKAAVRLSALQGLPVTYVFTHDSIAVGEDGPTHEPVEHLAGLR
AMPNLNVFRPADARETQAAWYLAVTSEKTPTALVLTRQNLTVEEGTDFNKVAKGAYVVYENTVDFDTILIATGSEVNLAV
AAAKELASQGAKVRVVSMPSTDVFDKQDAAYKEEILPNAVRRRVAVEMGATQNWYKYVGLDGAVLGIDTFGASAPAPKVL
AEYGFTVENLVKVVQNLK

Nucleotide


Download         Length: 1977 bp        

>NTDB_id=596570 M9H69_RS01245 WP_250315704.1 221134..223110(+) (recP/tkt) [Streptococcus oralis strain HP01]
ATGTCAAATCTATCTGTTAATGCAATTCGTTTTCTAGGTATTGACGCCATCAACAAAGCCAACTCAGGTCACCCAGGGGT
GGTTATGGGGGCTGCTCCAATGGCCTATAGCCTCTTTACAAAACAACTTCGTATCAATCCTGCTCAACCAAACTGGATCA
ACCGCGACCGCTTTATTCTTTCAGCAGGTCACGGCTCTATGCTTCTTTATGCCCTTCTTCACCTTTCTGGTTTTGAAGAT
GTTAGCATGGATGAAGTCAAGAACTTCCGCCAATGGGGTTCAAAAACACCAGGTCACCCAGAATTTGGCCATACTGCAGG
AGTTGACGCTACAACTGGTCCTCTAGGACAAGGGATTTCTACTGCTACTGGTTTTGCCCAAGCAGAACGTTTCCTTGCAG
CCAAGTATAACCGCGAAGGCTTCAATATCTTTGACCACTATACTTATGTGATCTGTGGCGACGGAGATTTGATGGAAGGT
GTTTCAAGCGAGGCAGCTTCATATGCAGGTTTGCAAAAACTTGACAAGTTGGTTGTTCTTTATGATTCAAATGACATTAA
CTTGGATGGTGAGACAAAAGATTCCTTCACAGAAAGTGTTCGTGACCGTTACAATGCCTACGGTTGGCATACAGCCTTGG
TTGAAGATGGAACAGACTTGGAAGCTATCCATGCTGCTATCGAAACAGCTAAAGCTTCAGGCAAACCATCTTTGATTGAA
GTGAAGACTGTTATTGGATACGGTTCTCCAAACAAACAAGGAACCAATGCGGTACACGGTGCTCCTCTTGGAGCAGATGA
AACTGCAGCAACTCGCCAAGCGCTTGGTTGGGACTATGAACCATTTGAAATCCCAGAGCAAGTTTATGCTGATTTCAAAG
AAAATGTTGCAGATCGTGGCGCATCAGCTTATCAAGCTTGGACAAAATTAGTTGCTGACTATAAAGAAGCGCATCCAGAA
CTGGCTGCAGAAGTAGAAGCTATTATCGACGGACGTGATCCAGTTAAAGTTACTCCAGCAGACTTCCCAGCTCTAGAAAA
CGGCTTCTCTCAAGCCACTCGTAATTCAAGTCAGGATGCCTTGAATGTTGTAGCTGCCAAGTTACCAACTTTCTTAGGTG
GATCAGCTGACCTTGCTCACTCAAACATGACTTATATCAAAACGGACGGACTTCAAGACGACGCTAATCGCTTGAACCGC
AACATTCAGTTTGGTGTTCGTGAATTTGCAATGGGAACGATCTTGAACGGGATGGCCCTTCACGGTGGACTTCGTGTATA
CGGTGGTACTTTCTTCGTCTTCTCTGACTATGTGAAGGCGGCTGTCCGCTTGTCAGCCTTACAAGGACTTCCTGTGACTT
ATGTCTTTACCCACGATTCTATTGCAGTCGGGGAAGATGGTCCAACTCACGAACCAGTTGAACACTTAGCAGGTCTTCGT
GCCATGCCAAATCTCAATGTTTTCCGCCCAGCAGATGCGCGTGAAACTCAAGCGGCTTGGTACCTTGCAGTGACAAGTGA
GAAAACACCAACTGCCCTTGTCTTGACACGTCAAAACTTGACTGTTGAAGAAGGGACAGATTTTAATAAAGTTGCAAAAG
GTGCCTATGTTGTCTATGAAAATACAGTAGATTTTGACACGATCTTGATTGCGACAGGTTCAGAGGTCAATCTGGCTGTC
GCAGCTGCCAAAGAATTGGCTAGTCAAGGCGCAAAAGTCCGCGTAGTCAGCATGCCATCTACAGATGTCTTTGATAAACA
AGATGCAGCTTACAAGGAAGAAATCCTTCCAAATGCAGTCCGCCGTCGTGTTGCAGTCGAAATGGGTGCAACTCAAAACT
GGTACAAATATGTCGGTCTTGATGGTGCAGTTCTTGGAATTGATACCTTCGGAGCATCTGCCCCAGCACCAAAAGTATTG
GCGGAGTACGGATTTACAGTTGAAAATCTAGTCAAAGTTGTTCAAAACTTGAAATAA

Domains

Predicted by InterProScan.

Transketolase, C-terminal domain (Transketolase_C)

(545-649)

Transketolase, pyrimidine binding domain (Transket_pyr)

(352-521)

Transketolase, thiamine diphosphate binding domain (Transketolase_N)

(3-334)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recP/tkt Streptococcus pneumoniae TIGR4

80.974

99.848

0.809