Detailed information NTG0596535

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: K4756_RS18770
• Genome accession: NZ_CP081458
• Coordinates: 3653980..3655125 (+)
• Length: 381 a.a.
• NCBI ID: WP_015384935.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain ps4060
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3648980..3660125

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K4756_RS18750 (K4756_18655)	albF	3648998..3650278 (+)	1281	WP_015483836.1	M16 family metallopeptidase	-
K4756_RS18755 (K4756_18660)	albG	3650275..3650976 (+)	702	WP_015384931.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
K4756_RS18760 (K4756_18665)	ywhL	3650982..3652355 (-)	1374	WP_015483837.1	YncE family protein	-
K4756_RS18765 (K4756_18670)	ywhK	3652395..3653750 (-)	1356	WP_015384933.1	YncE family protein	-
K4756_RS20695	-	3653747..3653977 (-)	231	WP_015483838.1	hypothetical protein	-
K4756_RS18770 (K4756_18675)	rapF	3653980..3655125 (+)	1146	WP_015384935.1	response regulator aspartate phosphatase RapF	Regulator
K4756_RS18775 (K4756_18680)	phrF	3655109..3655228 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
K4756_RS18780 (K4756_18685)	-	3655456..3655932 (+)	477	WP_015384936.1	hypothetical protein	-
K4756_RS18785 (K4756_18690)	-	3656192..3656878 (+)	687	WP_236822444.1	hypothetical protein	-
K4756_RS18790 (K4756_18695)	-	3658354..3659001 (+)	648	WP_015384940.1	ABC transporter ATP-binding protein	-
K4756_RS18795 (K4756_18700)	-	3658994..3659557 (+)	564	WP_015483840.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45617.08 Da
• Isoelectric Point: 5.1503

>NTDB_id=596535 K4756_RS18770 WP_015384935.1 3653980..3655125(+) (rapF) [Bacillus subtilis subsp. subtilis strain ps4060]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDHMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=596535 K4756_RS18770 WP_015384935.1 3653980..3655125(+) (rapF) [Bacillus subtilis subsp. subtilis strain ps4060]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTTAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCACATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTAATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAGAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.95	100	0.99
rapC	Bacillus subtilis subsp. subtilis str. 168	57.632	99.738	0.575