Detailed information NTG0596536

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: AW27_RS22095
• Genome accession: NZ_CP097800
• Coordinates: 5025854..5027140 (+)
• Length: 428 a.a.
• NCBI ID: WP_030840753.1
• Uniprot ID: A0ABY5PUL4
• Organism: Streptomyces sp. PCS3-D2 isolate P1
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5020854..5032140

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AW27_RS22060 (AW27_022030)	-	5021184..5021639 (+)	456	WP_037923714.1	HD domain-containing protein	-
AW27_RS22065 (AW27_022035)	-	5021795..5021989 (+)	195	WP_037923717.1	hypothetical protein	-
AW27_RS22080 (AW27_022050)	tig	5022652..5024046 (+)	1395	WP_037923720.1	trigger factor	-
AW27_RS22085 (AW27_022055)	-	5024358..5024975 (+)	618	WP_030760907.1	ATP-dependent Clp protease proteolytic subunit	-
AW27_RS22090 (AW27_022060)	clpP	5025032..5025700 (+)	669	WP_030649987.1	ATP-dependent Clp protease proteolytic subunit	Regulator
AW27_RS22095 (AW27_022065)	clpX	5025854..5027140 (+)	1287	WP_030840753.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
AW27_RS22100 (AW27_022070)	-	5027204..5028142 (-)	939	WP_037923726.1	hypothetical protein	-
AW27_RS22105 (AW27_022075)	-	5028270..5030891 (+)	2622	WP_037923727.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46946.87 Da
• Isoelectric Point: 4.7778

>NTDB_id=596536 AW27_RS22095 WP_030840753.1 5025854..5027140(+) (clpX) [Streptomyces sp. PCS3-D2 isolate P1]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLESYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
ADVVRSNVNPTLVPRIVPKDQGPHEKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=596536 AW27_RS22095 WP_030840753.1 5025854..5027140(+) (clpX) [Streptomyces sp. PCS3-D2 isolate P1]
GTGGCACGCATCGGTGACGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGACCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAAGAGGAGCTCGCGGAGACCT
CCGAGGTCCGGTGGGAGGAACTCCCCAAGCCCCGCGAGATCTACGAGTTCCTGGAGAGCTACGTCGTCGGCCAGGAGCCG
GCGAAGAAGGCGCTCTCGGTAGCGGTCTACAACCACTACAAGCGGGTCCAGGCCGGCGAGAACGGCGGCGCGCAGGGCCG
CGAAGACGCCATCGAGCTCGCGAAGTCCAACATCCTGCTGCTGGGTCCCACGGGCTCCGGCAAGACGCTCCTCGCGCAGA
CCCTGGCCCGCATGCTGAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACGCGCGACGTGAGCGGCGAGGGCGTGCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACGACGGCTTCGGTGCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTCTTCATCGTGGGCGGCGCCTTCGCCGGCCTGGAGAAGATCATCGAGTCGCGTGCCGGCGC
CAAGGGCATCGGCTTCGGGGCGACGATCCGCTCCAAGCGCGAGATCGAGGCCAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGTCTCCCGGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCATCGAGCCGCGCAACGCGCTGGTCAAGCAGTACCAGCGACTGTTCGAACTCGACGGTGT
CGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCGGACCAGGCGATCCTCCGCCAGACGGGCGCCCGCGGCCTGC
GCGCCATCATGGAAGAGGTCCTGATGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACG
GCGGACGTGGTCCGCTCCAACGTCAACCCGACGCTGGTCCCGCGCATCGTCCCGAAGGACCAGGGCCCGCACGAGAAGTC
GGCCTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.93	93.925	0.6
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.771	96.028	0.516