Detailed information NTG0593009

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: Sta3580_RS10360
• Genome accession: NZ_CP080458
• Coordinates: 2134341..2134667 (-)
• Length: 108 a.a.
• NCBI ID: WP_015900413.1
• Uniprot ID: -
• Organism: Staphylococcus carnosus strain KCTC 3580
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2129341..2139667

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Sta3580_RS10330 (Sta3580_10290)	gcvPA	2129854..2131200 (-)	1347	WP_015900409.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-
Sta3580_RS10335 (Sta3580_10295)	gcvT	2131221..2132315 (-)	1095	WP_015900410.1	glycine cleavage system aminomethyltransferase GcvT	-
Sta3580_RS10340 (Sta3580_10300)	-	2132506..2133045 (-)	540	WP_015900411.1	shikimate kinase	-
Sta3580_RS10345 (Sta3580_10305)	comGF	2133216..2133674 (-)	459	WP_158297486.1	competence type IV pilus minor pilin ComGF	-
Sta3580_RS10350 (Sta3580_10310)	-	2133631..2133927 (-)	297	WP_041612977.1	hypothetical protein	-
Sta3580_RS10355 (Sta3580_10315)	-	2133908..2134321 (-)	414	WP_231635362.1	prepilin-type cleavage/methylation domain-containing protein	-
Sta3580_RS10360 (Sta3580_10320)	comGC	2134341..2134667 (-)	327	WP_015900413.1	competence type IV pilus major pilin ComGC	Machinery gene
Sta3580_RS10365 (Sta3580_10325)	comGB	2134685..2135758 (-)	1074	WP_015900414.1	competence type IV pilus assembly protein ComGB	-
Sta3580_RS10370 (Sta3580_10330)	comGA	2135730..2136704 (-)	975	WP_015900415.1	competence type IV pilus ATPase ComGA	Machinery gene
Sta3580_RS10375 (Sta3580_10335)	-	2136775..2137398 (-)	624	WP_015900416.1	MBL fold metallo-hydrolase	-
Sta3580_RS10380 (Sta3580_10340)	-	2137398..2137727 (-)	330	WP_015900417.1	MTH1187 family thiamine-binding protein	-
Sta3580_RS10385 (Sta3580_10345)	-	2137727..2138713 (-)	987	WP_015900418.1	ROK family glucokinase	-
Sta3580_RS10390 (Sta3580_10350)	-	2138713..2138913 (-)	201	WP_015900419.1	YqgQ family protein	-

Sequence

Protein

• Length: 108 a.a.
• Molecular weight: 12186.36 Da
• Isoelectric Point: 9.8933

>NTDB_id=593009 Sta3580_RS10360 WP_015900413.1 2134341..2134667(-) (comGC) [Staphylococcus carnosus strain KCTC 3580]
MKRYYFKLKNKNLKAFTLLEMLLVLLVISVLLILIIPNIAKQSEHVQATGCEAQQKMVNSQIEAYSLKNNRKPDSIDELV
TQGYLKEAQKKCKSGESITIKNGEASIS

Nucleotide

• Length: 327 bp

>NTDB_id=593009 Sta3580_RS10360 WP_015900413.1 2134341..2134667(-) (comGC) [Staphylococcus carnosus strain KCTC 3580]
ATGAAAAGATATTACTTTAAATTGAAAAATAAAAACTTAAAAGCTTTTACATTGTTAGAAATGCTGCTTGTATTATTGGT
TATTAGTGTATTATTAATTTTAATTATACCGAATATCGCTAAACAATCTGAACATGTCCAGGCTACAGGTTGTGAGGCAC
AACAAAAAATGGTGAATAGTCAAATAGAAGCTTATTCACTTAAAAATAATAGAAAACCTGATAGTATTGATGAACTTGTT
ACACAAGGATATTTAAAAGAAGCTCAAAAGAAGTGTAAATCAGGAGAAAGTATAACAATAAAAAATGGTGAAGCATCAAT
TAGCTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (11-35)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus MW2	72.632	87.963	0.639
comGC	Staphylococcus aureus N315	72.632	87.963	0.639
comGC/cglC	Streptococcus mitis SK321	45.283	98.148	0.444
comGC/cglC	Streptococcus pneumoniae R6	44.34	98.148	0.435
comGC/cglC	Streptococcus pneumoniae D39	44.34	98.148	0.435
comGC/cglC	Streptococcus pneumoniae TIGR4	44.34	98.148	0.435
comGC/cglC	Streptococcus pneumoniae Rx1	44.34	98.148	0.435
comGC/cglC	Streptococcus mitis NCTC 12261	47.826	85.185	0.407
comYC	Streptococcus gordonii str. Challis substr. CH1	49.398	76.852	0.38
comGC	Bacillus subtilis subsp. subtilis str. 168	40.625	88.889	0.361