Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   MUO44_RS04410 Genome accession   NZ_CP094928
Coordinates   925739..926725 (+) Length   328 a.a.
NCBI ID   WP_001067042.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 8     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 920739..931725
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUO44_RS04395 (MUO44_04395) - 921146..922087 (+) 942 WP_000786736.1 ATP-binding cassette domain-containing protein -
  MUO44_RS04400 (MUO44_04400) - 922106..923761 (+) 1656 WP_065317196.1 peptide ABC transporter substrate-binding protein -
  MUO44_RS04405 (MUO44_04405) opp4A 923973..925688 (+) 1716 WP_000517176.1 oligopeptide ABC transporter substrate-binding protein -
  MUO44_RS04410 (MUO44_04410) amiE 925739..926725 (+) 987 WP_001067042.1 ABC transporter ATP-binding protein Regulator
  MUO44_RS04415 (MUO44_04415) - 926728..927708 (+) 981 WP_065317197.1 dipeptide ABC transporter ATP-binding protein -
  MUO44_RS04420 (MUO44_04420) opp4B 927701..928663 (+) 963 WP_000239820.1 oligopeptide ABC transporter permease -
  MUO44_RS04425 (MUO44_04425) opp4C 928675..929556 (+) 882 WP_065317198.1 oligopeptide ABC transporter permease -
  MUO44_RS04430 (MUO44_04430) trpS 929598..930587 (-) 990 WP_000448934.1 tryptophan--tRNA ligase -
  MUO44_RS04435 (MUO44_04435) spxA 930882..931277 (+) 396 WP_000258003.1 transcriptional regulator SpxA -

Sequence


Protein


Download         Length: 328 a.a.        Molecular weight: 37007.44 Da        Isoelectric Point: 8.1005

>NTDB_id=581502 MUO44_RS04410 WP_001067042.1 925739..926725(+) (amiE) [Staphylococcus aureus strain 8]
MNNVLLEVKDLETSLKINNEWLATVENISFELSKGEVLGIVGESGCGKSILSKSIIKLLPEKISKLSNGEVIFDGKRIDT
LNEKQLLDIRGNDIAMIFQEPMTALNPVFTIKNQLVESIKSHKKISKKEANNLAKDLLKKVGIARQDEILNSYPHQLSGG
MRQRVMIAMAISCSPKLLIADEPTTALDVTIQAQILDLLKELQKETQMAIMMITHDLSVVAEFCDKVLVMYAGQIVEFGG
IKEILHNPKHPYTQKLLSTIPKLKEEQKRLETIEGIVPSIQAFHVNKCRFANRCNKKMDICNNQSPKMHVCEDVIVRCHL
YKNEYKEI

Nucleotide


Download         Length: 987 bp        

>NTDB_id=581502 MUO44_RS04410 WP_001067042.1 925739..926725(+) (amiE) [Staphylococcus aureus strain 8]
ATGAATAATGTATTGTTAGAGGTTAAAGATTTAGAAACATCATTAAAAATAAATAATGAATGGTTAGCAACTGTTGAAAA
TATTTCTTTTGAATTATCTAAAGGAGAAGTTTTGGGTATAGTAGGGGAATCTGGTTGCGGTAAGTCCATATTAAGTAAGT
CAATTATTAAATTATTACCAGAAAAGATATCTAAACTAAGTAATGGAGAAGTTATATTTGATGGTAAACGAATCGATACG
CTCAATGAGAAGCAATTGCTAGATATTCGAGGAAATGATATTGCTATGATTTTTCAAGAACCTATGACTGCTTTAAATCC
TGTATTTACCATAAAAAATCAACTTGTGGAATCTATAAAATCACATAAAAAAATTTCTAAAAAAGAAGCAAATAACTTAG
CAAAAGATTTACTAAAAAAAGTTGGAATTGCTAGACAAGATGAAATATTAAATAGCTATCCTCATCAATTATCTGGTGGT
ATGAGACAAAGAGTAATGATTGCAATGGCCATTTCATGTTCTCCTAAATTATTAATTGCTGATGAACCTACAACAGCATT
GGATGTCACGATTCAAGCGCAAATATTAGACTTATTAAAAGAATTGCAAAAGGAAACGCAAATGGCAATTATGATGATTA
CACATGATTTGAGTGTAGTTGCTGAGTTTTGCGATAAAGTCTTAGTTATGTATGCAGGTCAAATTGTAGAATTTGGAGGC
ATAAAAGAAATACTACACAATCCGAAACATCCTTATACCCAAAAATTATTATCAACAATTCCAAAACTTAAAGAAGAGCA
GAAACGACTTGAAACGATAGAAGGAATTGTGCCATCAATCCAAGCATTTCACGTTAATAAGTGCAGATTTGCAAATAGAT
GTAACAAAAAAATGGATATTTGTAATAATCAATCTCCTAAAATGCATGTTTGTGAAGACGTCATTGTACGTTGTCATTTG
TACAAAAATGAATATAAGGAGATATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

44.551

95.122

0.424

  oppD Streptococcus mutans UA159

44.66

94.207

0.421

  amiE Streptococcus thermophilus LMG 18311

43.91

95.122

0.418

  amiE Streptococcus thermophilus LMD-9

43.91

95.122

0.418