Detailed information NTG0581503

Bioinformatically predicted

Overview

• Name: comEC/celB
• Type: Machinery gene
• Locus tag: JGX27_RS03640
• Genome accession: NZ_CP077423
• Coordinates: 666393..668624 (+)
• Length: 743 a.a.
• NCBI ID: WP_043878536.1
• Uniprot ID: -
• Organism: Streptococcus gallolyticus subsp. gallolyticus TX20005
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 661393..673624

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JGX27_RS03615 (JGX27_03615)	-	662154..663734 (+)	1581	WP_009853763.1	DEAD/DEAH box helicase	-
JGX27_RS03620 (JGX27_03620)	-	663778..664050 (-)	273	WP_009853764.1	GIY-YIG nuclease family protein	-
JGX27_RS03625 (JGX27_03625)	-	664025..664786 (-)	762	WP_009853765.1	tRNA1(Val) (adenine(37)-N6)-methyltransferase	-
JGX27_RS03630 (JGX27_03630)	-	664894..665640 (+)	747	WP_009853766.1	1-acyl-sn-glycerol-3-phosphate acyltransferase	-
JGX27_RS03635 (JGX27_03635)	comEA	665735..666400 (+)	666	WP_009853767.1	helix-hairpin-helix domain-containing protein	Machinery gene
JGX27_RS03640 (JGX27_03640)	comEC/celB	666393..668624 (+)	2232	WP_043878536.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
JGX27_RS03645 (JGX27_03645)	holA	668698..669735 (+)	1038	WP_009853769.1	DNA polymerase III subunit delta	-
JGX27_RS03650 (JGX27_03650)	sodA	669824..670432 (+)	609	WP_014619989.1	superoxide dismutase SodA	-
JGX27_RS03655 (JGX27_03655)	-	670584..671309 (+)	726	WP_012961667.1	YebC/PmpR family DNA-binding transcriptional regulator	-
JGX27_RS03660 (JGX27_03660)	queA	671341..672369 (-)	1029	WP_009853772.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
JGX27_RS03665 (JGX27_03665)	-	672545..673045 (+)	501	WP_009853773.1	VIT1/CCC1 transporter family protein	-

Sequence

Protein

• Length: 743 a.a.
• Molecular weight: 83699.00 Da
• Isoelectric Point: 8.3630

>NTDB_id=581503 JGX27_RS03640 WP_043878536.1 666393..668624(+) (comEC/celB) [Streptococcus gallolyticus subsp. gallolyticus TX20005]
MIKYFPIKPIQLAFLLILLYYFCFSKVIGCLMFLLLALVFLWQQYGWKAWCQVCLCLSCFAVFFLTKSNQTEQAYQAAPA
HLAKIQMIPDTISVNGDLLSFRGKEAGRTYQIFYTLKSEKEQHFFKTLNQTVVLSGDMDLEEATPQRNFGGFDYRTYLKH
EGIYRVVNLSAINNVELVYKMTLWEKLHDVRRKAIVSIQQHFPAPMQHYMTGLLFGYLDKSFDEMSDVYTSLGIIHLFAL
SGMQVGFFVGAFRFFFLRLGLRRDYVDILQIPFSLVYAGLTGFSVSVIRSLIQSAFANLGIKKLDNLALTLFVLFIVMPN
FLLTTGGILSFTYAFILSFINFDDISRYQKIIAESLTISLASLPLLIHFFAVFQPLSVLLTAIFSVAFDTIMLPMLSIVF
ILSPLVKLTCFNGCFVFLETVIKNTKAILGGPIVFGKPSLGILVLLFLTLGVLYDCWRRKKMAIFLVSLVGLLFFQIKHP
LENEVTVVDIGQGDSIFVRDVKGHTLLIDVGGKVSFSEKNAWQERLTDSNAERTLIPYLNSRGVGKIDQLVLTHTDTDHM
GDMLEVAKQVKIGEILVSQGSLTKPDFVAKLQAMKTKVHVVTAGDVLPIMGSHLQVLYPSQTGDGGNNDSVVLYGNLLGK
NFLFTGDLEEEGEQELIATYPNLPVDVLKAGHHGSKGSSSSEFLAHISPQIALISAGQNNRYKHPHQETLERFRAQNMTI
YRTDEQGAIRFRGLNHWKIETVR

Nucleotide

• Length: 2232 bp

>NTDB_id=581503 JGX27_RS03640 WP_043878536.1 666393..668624(+) (comEC/celB) [Streptococcus gallolyticus subsp. gallolyticus TX20005]
TTGATTAAATATTTTCCCATTAAGCCAATTCAATTGGCTTTTTTGCTCATTTTGCTCTATTATTTTTGCTTTTCAAAAGT
GATTGGGTGTTTGATGTTTCTCTTGCTAGCCTTGGTGTTTTTATGGCAACAGTATGGTTGGAAGGCTTGGTGTCAAGTTT
GCTTGTGTTTAAGCTGTTTTGCGGTATTTTTTCTGACTAAGTCTAATCAGACAGAGCAGGCTTATCAAGCAGCACCAGCT
CATTTAGCAAAAATCCAGATGATTCCTGACACGATTTCGGTCAATGGGGATTTGCTGTCCTTTCGAGGTAAGGAAGCTGG
GCGGACTTATCAGATTTTTTATACCTTGAAATCGGAGAAAGAACAGCATTTTTTTAAGACATTAAATCAAACGGTTGTTT
TATCTGGTGATATGGACTTGGAAGAAGCAACGCCCCAGCGGAATTTTGGTGGTTTTGATTATCGTACTTACCTTAAACAT
GAAGGCATTTATCGTGTGGTAAATTTGTCGGCGATTAACAATGTTGAACTTGTTTATAAGATGACTTTGTGGGAGAAGCT
ACATGATGTTCGGCGAAAGGCTATTGTTAGTATTCAGCAACATTTTCCTGCTCCTATGCAACATTATATGACTGGGCTTT
TGTTTGGCTATCTGGATAAATCGTTTGATGAGATGAGTGATGTTTACACGAGTTTAGGAATTATTCACCTCTTTGCTCTT
TCAGGCATGCAGGTCGGCTTTTTTGTGGGGGCATTCCGCTTTTTCTTTCTACGTCTTGGGTTACGCCGAGATTATGTGGA
CATACTACAAATTCCATTTTCACTCGTCTATGCGGGGCTGACTGGCTTTTCTGTTTCGGTGATTCGGAGTTTAATTCAAT
CTGCTTTTGCAAATCTTGGTATTAAAAAATTAGATAACTTAGCTTTAACTTTGTTTGTTCTTTTCATAGTTATGCCAAAT
TTTCTGCTGACGACGGGAGGCATTCTTTCGTTTACTTACGCTTTTATTCTCAGTTTTATTAACTTTGATGACATTAGTCG
CTATCAGAAAATCATTGCGGAAAGTTTGACGATTTCATTAGCCAGTTTGCCCTTGTTAATTCATTTTTTTGCTGTGTTTC
AACCGTTATCTGTCTTATTGACAGCAATTTTTTCTGTGGCATTTGACACTATTATGTTGCCAATGCTATCAATCGTTTTT
ATTTTATCGCCCTTGGTTAAACTGACTTGTTTTAATGGTTGTTTTGTTTTCTTGGAAACTGTTATCAAGAACACTAAGGC
AATTTTGGGCGGTCCGATTGTTTTTGGTAAACCAAGTCTTGGTATCTTGGTGCTACTATTTTTAACATTAGGCGTGCTTT
ATGATTGCTGGCGACGAAAGAAAATGGCAATTTTTCTTGTCAGCTTAGTAGGTCTGCTATTTTTTCAAATCAAGCATCCG
CTAGAAAACGAGGTGACGGTGGTTGATATTGGGCAGGGAGATAGTATTTTTGTGCGTGATGTTAAGGGGCATACGCTGCT
AATTGATGTGGGCGGAAAGGTGAGTTTTAGTGAGAAGAACGCGTGGCAGGAGCGGCTGACGGATAGCAATGCGGAGCGAA
CGTTGATTCCTTATCTCAACAGTCGCGGCGTTGGAAAAATTGACCAGTTAGTTCTGACGCACACGGATACTGACCACATG
GGAGATATGCTGGAAGTGGCAAAGCAGGTGAAAATTGGTGAAATTCTGGTTAGTCAGGGAAGTTTGACAAAACCAGATTT
TGTGGCGAAATTACAAGCCATGAAAACCAAGGTGCACGTGGTAACAGCTGGTGATGTTTTGCCGATTATGGGAAGTCACC
TGCAAGTGCTTTATCCGAGCCAGACTGGTGATGGTGGTAACAATGACTCGGTGGTGCTTTATGGGAATCTTTTGGGTAAG
AATTTCTTATTTACAGGAGATTTGGAAGAAGAAGGCGAGCAAGAGTTGATAGCAACTTATCCCAATCTGCCGGTTGATGT
CTTAAAAGCAGGACATCATGGCTCAAAAGGGTCATCAAGCTCAGAATTTCTCGCTCACATTTCACCGCAAATTGCTTTGA
TTTCCGCAGGGCAAAATAACCGCTACAAACATCCTCATCAAGAAACGCTTGAACGCTTCCGAGCACAAAACATGACCATT
TACCGTACAGACGAACAAGGCGCTATCCGCTTTAGAGGATTAAACCACTGGAAAATCGAAACAGTGAGGTAG

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (27-174)

• Metallo-beta-lactamase superfamily (Lactamase_B) (491-697)

• Competence protein (Competence) (213-459)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/celB	Streptococcus mitis NCTC 12261	52.695	99.865	0.526
comEC/celB	Streptococcus mitis SK321	52.426	99.865	0.524
comEC/celB	Streptococcus pneumoniae TIGR4	51.144	100	0.511
comEC/celB	Streptococcus pneumoniae Rx1	50.606	100	0.506
comEC/celB	Streptococcus pneumoniae D39	50.606	100	0.506
comEC/celB	Streptococcus pneumoniae R6	50.606	100	0.506
comEC	Lactococcus lactis subsp. cremoris KW2	47.914	100	0.479