Detailed information
Bioinformatically predicted
Overview
| Name | pilC | Type | Machinery gene |
| Locus tag | KR767_RS01570 | Genome accession | NZ_CP077072 |
| Coordinates | 346936..348201 (+) | Length | 421 a.a. |
| NCBI ID | WP_250877895.1 | Uniprot ID | - |
| Organism | Luteibacter anthropi strain SM7.4 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 341936..353201
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KR767_RS01550 (KR767_01560) | - | 341951..342868 (+) | 918 | WP_250877891.1 | glycosyltransferase | - |
| KR767_RS01555 (KR767_01565) | - | 342860..344065 (-) | 1206 | WP_250877892.1 | glycosyltransferase | - |
| KR767_RS01560 (KR767_01570) | - | 344058..344912 (-) | 855 | WP_250877893.1 | glycosyltransferase family 2 protein | - |
| KR767_RS01565 (KR767_01575) | pilB | 345069..346802 (+) | 1734 | WP_250877894.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| KR767_RS01570 (KR767_01580) | pilC | 346936..348201 (+) | 1266 | WP_250877895.1 | type II secretion system F family protein | Machinery gene |
| KR767_RS01575 (KR767_01585) | - | 348106..349470 (-) | 1365 | WP_250877896.1 | hypothetical protein | - |
| KR767_RS01580 (KR767_01590) | - | 349675..350544 (+) | 870 | WP_250877897.1 | A24 family peptidase | - |
| KR767_RS01585 (KR767_01595) | coaE | 350541..351149 (+) | 609 | WP_166952735.1 | dephospho-CoA kinase | - |
| KR767_RS01590 (KR767_01600) | - | 351350..352600 (-) | 1251 | WP_166952732.1 | GGDEF domain-containing phosphodiesterase | - |
Sequence
Protein
Download Length: 421 a.a. Molecular weight: 46072.23 Da Isoelectric Point: 10.0434
>NTDB_id=578617 KR767_RS01570 WP_250877895.1 346936..348201(+) (pilC) [Luteibacter anthropi strain SM7.4]
MAFATANKNTKAIGAARAEVAKMAMYEWSALDKRGKRMNGEMQAKNASLVKAELRRQGMNPQQVREKPKPLFGASGSTVK
PRDVAIFSRQISTMMASGVPMVQAFDIIASGQKNIRFKNILTDVKTNIEGGASLHEALGQYPIQFDELYRNLVHAGEQAG
VLDTILDTVATYKERVEAIKGKIKKALFYPAMVLVVALLVTMILLLFVVPVFQQTFKDAGADLPVPTLVVVKASEFMQSY
WWLVIGSIAGMITVFIMAKKRSQKFAHFLDRLSLRIPIIGVVLRQSALARFARTLGVTFQAGVPLVEALEAVSGATGSIV
YGEAVLRMRDDVSVGHQLQLAMRQTNLFPNMVVQMTAIGEEAGSLDSMLFKVAEFYEEEVNNAVDTLSSLLEPFIMVILG
TLVGGMVISLYLPIFKIAGTT
MAFATANKNTKAIGAARAEVAKMAMYEWSALDKRGKRMNGEMQAKNASLVKAELRRQGMNPQQVREKPKPLFGASGSTVK
PRDVAIFSRQISTMMASGVPMVQAFDIIASGQKNIRFKNILTDVKTNIEGGASLHEALGQYPIQFDELYRNLVHAGEQAG
VLDTILDTVATYKERVEAIKGKIKKALFYPAMVLVVALLVTMILLLFVVPVFQQTFKDAGADLPVPTLVVVKASEFMQSY
WWLVIGSIAGMITVFIMAKKRSQKFAHFLDRLSLRIPIIGVVLRQSALARFARTLGVTFQAGVPLVEALEAVSGATGSIV
YGEAVLRMRDDVSVGHQLQLAMRQTNLFPNMVVQMTAIGEEAGSLDSMLFKVAEFYEEEVNNAVDTLSSLLEPFIMVILG
TLVGGMVISLYLPIFKIAGTT
Nucleotide
Download Length: 1266 bp
>NTDB_id=578617 KR767_RS01570 WP_250877895.1 346936..348201(+) (pilC) [Luteibacter anthropi strain SM7.4]
ATGGCATTTGCCACCGCCAACAAGAACACCAAGGCCATCGGCGCCGCCCGCGCGGAGGTCGCCAAGATGGCGATGTACGA
ATGGAGCGCCCTGGACAAGCGCGGCAAGCGCATGAACGGCGAAATGCAAGCGAAGAATGCCTCCCTCGTGAAGGCCGAGC
TGCGCCGCCAGGGTATGAACCCCCAGCAGGTGCGGGAAAAACCCAAGCCGCTGTTCGGGGCCTCGGGCTCCACAGTGAAG
CCCCGCGACGTAGCGATCTTCAGCCGCCAGATCTCCACGATGATGGCGTCGGGCGTACCGATGGTGCAGGCCTTCGACAT
CATTGCCAGCGGCCAGAAGAATATCCGCTTCAAGAATATCCTTACCGATGTCAAAACCAACATCGAAGGCGGCGCCTCAT
TGCACGAGGCGCTGGGTCAGTACCCGATACAATTCGACGAGCTTTACCGGAACCTCGTCCATGCAGGTGAGCAAGCCGGT
GTGCTGGACACCATTCTGGACACGGTTGCCACCTACAAGGAGCGCGTGGAAGCCATCAAAGGCAAGATCAAGAAGGCCCT
TTTCTACCCTGCCATGGTGCTCGTGGTTGCCTTGCTCGTAACAATGATCCTGCTGCTCTTCGTCGTGCCGGTGTTCCAGC
AGACATTCAAGGACGCCGGTGCCGACCTGCCTGTACCCACACTCGTGGTAGTGAAAGCGTCTGAATTCATGCAGAGCTAT
TGGTGGCTTGTCATCGGCAGTATCGCGGGCATGATTACCGTGTTCATCATGGCCAAGAAGCGCTCGCAGAAGTTTGCTCA
TTTCCTGGATAGGCTCTCTCTGCGGATTCCGATCATCGGTGTTGTCCTGCGTCAGTCGGCGTTGGCCCGCTTCGCCCGGA
CCCTTGGCGTGACCTTCCAGGCAGGCGTGCCGCTGGTTGAGGCACTCGAGGCCGTTTCGGGTGCCACCGGAAGTATTGTT
TACGGTGAAGCCGTGCTGCGTATGCGCGATGACGTATCCGTCGGTCACCAATTGCAGCTGGCCATGCGCCAGACCAATCT
GTTTCCAAACATGGTGGTGCAGATGACAGCGATCGGCGAGGAAGCGGGCTCACTCGACTCGATGCTTTTCAAGGTGGCCG
AATTCTACGAAGAAGAAGTAAACAACGCTGTCGATACCCTCAGCAGTTTGCTAGAACCCTTCATCATGGTGATCCTCGGC
ACCCTGGTCGGCGGTATGGTCATTTCGCTTTATCTGCCCATCTTCAAGATTGCCGGTACCACGTAA
ATGGCATTTGCCACCGCCAACAAGAACACCAAGGCCATCGGCGCCGCCCGCGCGGAGGTCGCCAAGATGGCGATGTACGA
ATGGAGCGCCCTGGACAAGCGCGGCAAGCGCATGAACGGCGAAATGCAAGCGAAGAATGCCTCCCTCGTGAAGGCCGAGC
TGCGCCGCCAGGGTATGAACCCCCAGCAGGTGCGGGAAAAACCCAAGCCGCTGTTCGGGGCCTCGGGCTCCACAGTGAAG
CCCCGCGACGTAGCGATCTTCAGCCGCCAGATCTCCACGATGATGGCGTCGGGCGTACCGATGGTGCAGGCCTTCGACAT
CATTGCCAGCGGCCAGAAGAATATCCGCTTCAAGAATATCCTTACCGATGTCAAAACCAACATCGAAGGCGGCGCCTCAT
TGCACGAGGCGCTGGGTCAGTACCCGATACAATTCGACGAGCTTTACCGGAACCTCGTCCATGCAGGTGAGCAAGCCGGT
GTGCTGGACACCATTCTGGACACGGTTGCCACCTACAAGGAGCGCGTGGAAGCCATCAAAGGCAAGATCAAGAAGGCCCT
TTTCTACCCTGCCATGGTGCTCGTGGTTGCCTTGCTCGTAACAATGATCCTGCTGCTCTTCGTCGTGCCGGTGTTCCAGC
AGACATTCAAGGACGCCGGTGCCGACCTGCCTGTACCCACACTCGTGGTAGTGAAAGCGTCTGAATTCATGCAGAGCTAT
TGGTGGCTTGTCATCGGCAGTATCGCGGGCATGATTACCGTGTTCATCATGGCCAAGAAGCGCTCGCAGAAGTTTGCTCA
TTTCCTGGATAGGCTCTCTCTGCGGATTCCGATCATCGGTGTTGTCCTGCGTCAGTCGGCGTTGGCCCGCTTCGCCCGGA
CCCTTGGCGTGACCTTCCAGGCAGGCGTGCCGCTGGTTGAGGCACTCGAGGCCGTTTCGGGTGCCACCGGAAGTATTGTT
TACGGTGAAGCCGTGCTGCGTATGCGCGATGACGTATCCGTCGGTCACCAATTGCAGCTGGCCATGCGCCAGACCAATCT
GTTTCCAAACATGGTGGTGCAGATGACAGCGATCGGCGAGGAAGCGGGCTCACTCGACTCGATGCTTTTCAAGGTGGCCG
AATTCTACGAAGAAGAAGTAAACAACGCTGTCGATACCCTCAGCAGTTTGCTAGAACCCTTCATCATGGTGATCCTCGGC
ACCCTGGTCGGCGGTATGGTCATTTCGCTTTATCTGCCCATCTTCAAGATTGCCGGTACCACGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilC | Legionella pneumophila strain ERS1305867 |
53.827 |
93.112 |
0.501 |
| pilC | Pseudomonas stutzeri DSM 10701 |
51.01 |
94.062 |
0.48 |
| pilC | Acinetobacter baylyi ADP1 |
50.253 |
94.062 |
0.473 |
| pilC | Acinetobacter baumannii D1279779 |
50.126 |
94.299 |
0.473 |
| pilG | Neisseria gonorrhoeae MS11 |
41.406 |
91.211 |
0.378 |
| pilG | Neisseria meningitidis 44/76-A |
41.146 |
91.211 |
0.375 |
| pilC | Vibrio campbellii strain DS40M4 |
38.931 |
93.349 |
0.363 |