Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   KPL75_RS05220 Genome accession   NZ_CP076653
Coordinates   1012943..1014181 (-) Length   412 a.a.
NCBI ID   WP_002111335.1    Uniprot ID   A0A1D3MQY9
Organism   Bacillus sp. NP247     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 1007943..1019181
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KPL75_RS05200 (KPL75_05195) spoVS 1008336..1008596 (-) 261 WP_000404341.1 stage V sporulation protein SpoVS -
  KPL75_RS05205 (KPL75_05200) - 1008746..1009540 (-) 795 WP_002014601.1 TIGR00282 family metallophosphoesterase -
  KPL75_RS05210 (KPL75_05205) rny 1009719..1011284 (-) 1566 WP_219919664.1 ribonuclease Y -
  KPL75_RS05215 (KPL75_05210) recA 1011768..1012799 (-) 1032 WP_002014599.1 recombinase RecA Machinery gene
  KPL75_RS05220 (KPL75_05215) cinA 1012943..1014181 (-) 1239 WP_002111335.1 competence/damage-inducible protein A Machinery gene
  KPL75_RS05225 (KPL75_05220) pgsA 1014202..1014780 (-) 579 WP_002111336.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  KPL75_RS05230 (KPL75_05225) - 1014844..1015755 (-) 912 WP_219921071.1 helix-turn-helix domain-containing protein -
  KPL75_RS05235 (KPL75_05230) - 1015777..1016562 (-) 786 WP_002146128.1 DUF3388 domain-containing protein -
  KPL75_RS05240 (KPL75_05235) - 1016702..1016950 (-) 249 WP_000114449.1 DUF3243 domain-containing protein -
  KPL75_RS05245 (KPL75_05240) ymfI 1017025..1017738 (-) 714 WP_002146126.1 elongation factor P 5-aminopentanone reductase -
  KPL75_RS05250 (KPL75_05245) yfmH 1017855..1019141 (-) 1287 WP_002014592.1 EF-P 5-aminopentanol modification-associated protein YfmH -

Sequence

Protein


Download         Length: 412 a.a.        Molecular weight: 45579.00 Da        Isoelectric Point: 5.3492

>NTDB_id=576979 KPL75_RS05220 WP_002111335.1 1012943..1014181(-) (cinA) [Bacillus sp. NP247]
MNAEIIAVGTELLLGQIANTNAQFLSEKLASIGINVYYHTVVGDNNKRLQKAIELAEERADMLIFTGGLGPTKDDLTKET
IASSLDEELVYDEKALTSISDYFKRTGREFTENNKKQALVLNGSTVFANDHGMAPGMGLNKNGKVYILLPGPPKEMKPMY
ISYVEPFLCKFTTGENIYSRVLRFFGIGESQLEVKVQDLIDGQTNPTIAPLANDGEVTLRLTAKHHDADEAEKLIQHVED
LILERVGEFFYGYDQDFLHYKAIRLLKEKGLTLACAESLTGGLFGNQVTENAGVSSVFKGGVICYQNDVKQQILHVPEEV
LRTDGAVSKQCARYLAENVKKLLKADIGISFTGVAGPDASEHKEPGTVFIGLVIKDEPAVVFSLNLSGSRQQIRERSTKY
GFYHLFKKLEEI

Nucleotide


Download         Length: 1239 bp        

>NTDB_id=576979 KPL75_RS05220 WP_002111335.1 1012943..1014181(-) (cinA) [Bacillus sp. NP247]
ATGAATGCTGAAATTATTGCGGTTGGAACGGAATTATTACTTGGACAAATTGCAAATACAAACGCCCAGTTTTTATCTGA
AAAGTTAGCTTCAATCGGAATTAACGTGTACTACCATACTGTTGTTGGGGATAATAACAAGCGATTACAGAAGGCAATTG
AATTGGCTGAAGAACGAGCTGATATGCTCATTTTTACAGGTGGATTAGGACCGACAAAAGATGATTTAACAAAAGAAACA
ATAGCATCTAGTTTAGATGAAGAGCTTGTGTATGATGAAAAGGCATTAACATCGATAAGCGATTATTTTAAGCGTACAGG
CCGTGAATTTACAGAGAATAATAAAAAGCAGGCGCTCGTTTTAAATGGATCGACTGTATTTGCGAATGATCACGGTATGG
CGCCTGGTATGGGGTTAAATAAGAACGGAAAAGTTTATATTTTATTACCAGGACCACCAAAAGAAATGAAGCCGATGTAT
ATAAGTTACGTAGAGCCTTTTTTATGTAAGTTTACAACGGGGGAAAATATTTATTCTCGTGTTCTTCGTTTTTTTGGTAT
TGGGGAATCTCAATTAGAGGTGAAAGTTCAAGATTTAATTGATGGTCAAACGAATCCAACCATTGCACCACTCGCAAATG
ATGGAGAAGTGACATTACGTTTAACTGCCAAACATCATGATGCTGATGAGGCGGAGAAACTGATTCAGCATGTGGAAGAT
TTGATTTTAGAAAGAGTAGGAGAATTTTTCTACGGATATGACCAAGATTTCCTTCATTACAAGGCAATAAGGCTATTGAA
GGAAAAAGGGTTAACTTTAGCATGTGCAGAAAGTTTAACAGGTGGTCTTTTTGGAAATCAAGTAACAGAAAATGCTGGTG
TTTCGTCTGTATTTAAAGGCGGTGTCATTTGTTATCAAAATGATGTGAAGCAACAAATTTTACATGTACCTGAAGAAGTG
TTGCGCACTGACGGCGCGGTTAGTAAACAGTGTGCTCGTTATCTTGCTGAAAATGTAAAGAAACTGTTAAAAGCAGATAT
CGGAATTAGTTTCACTGGGGTGGCAGGACCGGATGCTTCAGAACATAAAGAACCAGGAACAGTATTTATTGGATTGGTGA
TTAAAGATGAACCAGCTGTAGTCTTCTCGCTTAATTTAAGTGGAAGTCGTCAACAAATTAGAGAACGCTCTACAAAATAT
GGATTTTATCATTTATTTAAAAAGCTAGAAGAGATATAA

Domains

Predicted by InterproScan.

Damage-inducible protein CinA KH domain (CinA_KH)

(179-252)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-168)

Competence-damaged protein (CinA)

(259-408)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1D3MQY9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

59.466

100

0.595
  cinA Streptococcus mitis SK321

46.062

100

0.468
  cinA Streptococcus pneumoniae TIGR4

46.062

100

0.468
  cinA Streptococcus pneumoniae Rx1

45.585

100

0.464
  cinA Streptococcus pneumoniae R6

45.585

100

0.464
  cinA Streptococcus mitis NCTC 12261

45.346

100

0.461
  cinA Streptococcus pneumoniae D39

45.346

100

0.461
  cinA Streptococcus mutans UA159

46.552

98.544

0.459
  cinA Streptococcus suis isolate S10

41.223

91.262

0.376