Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   ML603_RS07740 Genome accession   NZ_CP092887
Coordinates   1573920..1574981 (-) Length   353 a.a.
NCBI ID   WP_241067010.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. equisimilis strain Karl     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1568920..1579981
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ML603_RS07715 (ML603_07715) - 1569081..1570472 (+) 1392 WP_241067696.1 ISNCY family transposase -
  ML603_RS07725 (ML603_07725) trmB 1570890..1571525 (-) 636 WP_003052470.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ML603_RS07730 (ML603_07730) - 1571525..1572316 (-) 792 WP_003052472.1 phosphotransferase family protein -
  ML603_RS07735 (ML603_07735) - 1572506..1573897 (+) 1392 WP_241067696.1 ISNCY family transposase -
  ML603_RS07740 (ML603_07740) pptB 1573920..1574981 (-) 1062 WP_241067010.1 ABC transporter permease Regulator
  ML603_RS07745 (ML603_07745) pptA 1574984..1575709 (-) 726 WP_192942317.1 ABC transporter ATP-binding protein Regulator
  ML603_RS07750 (ML603_07750) - 1575781..1576200 (+) 420 WP_012767493.1 HIT family protein -
  ML603_RS07755 (ML603_07755) - 1576197..1576526 (+) 330 WP_143927873.1 chemotaxis protein -
  ML603_RS07760 (ML603_07760) - 1576684..1577952 (-) 1269 WP_192942318.1 LCP family protein -
  ML603_RS07765 (ML603_07765) - 1577964..1578485 (-) 522 WP_241067011.1 N-acetyltransferase -
  ML603_RS07770 (ML603_07770) tsaE 1578478..1578921 (-) 444 WP_143927875.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence


Protein


Download         Length: 353 a.a.        Molecular weight: 41300.72 Da        Isoelectric Point: 10.2112

>NTDB_id=568784 ML603_RS07740 WP_241067010.1 1573920..1574981(-) (pptB) [Streptococcus dysgalactiae subsp. equisimilis strain Karl]
MKALFLKRRQDFQKQQSKYLRYVFNDHFVLVLMFLLGFCLVQYSQLLKHFPSNHWPIWLFLMVGMLLLLHLGSVATYLEE
PDHHFLLPKEEAVVAHIKQAERSALVIWGCLQTVILIFLYPIFNRLGFSLVTFALLLLGLLALKRLLLGYKVRQFLKKDG
LDWEKAIAFESNRKQAILKFYSLFTNVKGISTKVKKRSYLNPLLKLVKENSKHLWLTLYLKAFLRSSDYLGLFLRLLLLS
SLALLFISNTYLSVALALVFNYLILFQLLSLYHHYDYHYMTSLYPENHQGKRANLLTFLRGLSCLILVINLLLCHSLEKA
LILVVVMGVITLFYLPYKLKKIMSIENDYVPKN

Nucleotide


Download         Length: 1062 bp        

>NTDB_id=568784 ML603_RS07740 WP_241067010.1 1573920..1574981(-) (pptB) [Streptococcus dysgalactiae subsp. equisimilis strain Karl]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAGAGCAAATACCTGCGCTATGTCTTTAATGACCA
TTTTGTCTTGGTCCTGATGTTTTTGCTTGGTTTTTGCTTGGTGCAATACAGCCAGTTATTGAAGCATTTTCCTAGTAACC
ATTGGCCTATATGGCTCTTTCTCATGGTGGGGATGCTGTTATTGCTTCACTTGGGCTCGGTGGCAACTTATTTAGAAGAG
CCTGATCACCATTTTCTACTTCCGAAAGAAGAAGCTGTGGTTGCTCATATTAAACAAGCTGAACGCTCTGCTCTTGTGAT
TTGGGGCTGTTTACAGACAGTTATCCTCATCTTTTTATATCCAATCTTCAATCGCCTAGGCTTCTCCTTAGTTACTTTTG
CTCTTTTACTTTTGGGATTACTAGCTCTTAAACGACTCCTTTTGGGGTATAAAGTAAGACAATTTTTAAAGAAAGATGGA
CTGGATTGGGAAAAAGCCATTGCTTTTGAGAGTAATCGTAAACAGGCTATCTTAAAGTTTTATTCTCTTTTCACAAATGT
TAAGGGAATTTCCACAAAGGTTAAGAAAAGATCTTATTTAAATCCTCTTCTAAAATTGGTAAAAGAAAATAGTAAGCACC
TCTGGCTAACGCTCTATTTAAAAGCTTTTTTACGAAGTTCAGACTATTTAGGACTCTTTTTACGCTTGTTATTATTGAGT
TCCCTAGCCTTGCTATTTATTTCTAACACTTACCTATCAGTGGCTTTAGCCCTGGTCTTTAATTATTTGATTCTTTTTCA
ATTGTTGTCTCTTTACCACCATTACGATTACCACTACATGACCAGTCTTTATCCAGAGAATCATCAAGGGAAGCGGGCGA
ATCTATTGACTTTTTTGAGAGGATTAAGTTGTCTGATATTAGTTATCAACCTCCTGCTCTGCCATTCTTTAGAAAAAGCT
CTTATTTTAGTTGTGGTCATGGGAGTCATTACACTTTTCTACCTCCCTTATAAGTTGAAGAAGATAATGTCAATCGAAAA
TGATTATGTCCCAAAAAATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

46.512

97.45

0.453

  pptB Streptococcus salivarius strain HSISS4

46.221

97.45

0.45