Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   KIP81_RS09395 Genome accession   NZ_CP075172
Coordinates   1899611..1900870 (-) Length   419 a.a.
NCBI ID   WP_074629880.1    Uniprot ID   -
Organism   Streptococcus equinus strain SheepZ001     
Function   require for competence (predicted from homology)   
Unclear

Genomic Context

Location: 1894611..1905870
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIP81_RS09365 (KIP81_09355) - 1894698..1896275 (-) 1578 WP_243602887.1 DUF2079 domain-containing protein -
  KIP81_RS09845 - 1896318..1896446 (-) 129 WP_021143294.1 hypothetical protein -
  KIP81_RS09370 (KIP81_09360) - 1896545..1896862 (-) 318 WP_006531413.1 DUF1292 domain-containing protein -
  KIP81_RS09375 (KIP81_09365) ruvX 1896895..1897314 (-) 420 WP_004233508.1 Holliday junction resolvase RuvX -
  KIP81_RS09380 (KIP81_09370) - 1897311..1897580 (-) 270 WP_004233510.1 IreB family regulatory phosphoprotein -
  KIP81_RS09385 (KIP81_09375) spx 1897812..1898210 (-) 399 WP_004233512.1 transcriptional regulator Spx -
  KIP81_RS09390 (KIP81_09380) recA 1898407..1899561 (-) 1155 WP_004233517.1 recombinase RecA Machinery gene
  KIP81_RS09395 (KIP81_09385) cinA 1899611..1900870 (-) 1260 WP_074629880.1 competence/damage-inducible protein A Machinery gene
  KIP81_RS09400 (KIP81_09390) - 1900984..1902186 (-) 1203 WP_074629881.1 MFS transporter -
  KIP81_RS09405 (KIP81_09395) - 1902311..1902868 (-) 558 WP_243602888.1 DNA-3-methyladenine glycosylase I -
  KIP81_RS09410 (KIP81_09400) ruvA 1902898..1903491 (-) 594 WP_024344431.1 Holliday junction branch migration protein RuvA -
  KIP81_RS09415 (KIP81_09405) mutL 1903492..1905435 (-) 1944 WP_243602889.1 DNA mismatch repair endonuclease MutL -

Sequence

Protein


Download         Length: 419 a.a.        Molecular weight: 45659.03 Da        Isoelectric Point: 4.9817

>NTDB_id=568282 KIP81_RS09395 WP_074629880.1 1899611..1900870(-) (cinA) [Streptococcus equinus strain SheepZ001]
MKAEIIAVGTEILTGQITNTNAQFLSEEFAKLGIDVFFQTAVGDNEERLLSTIDLASKRSDLVVLCGGLGPTEDDLTKQT
LAKYLGRNLVFDEQASKRLDEFFATRPQFTRTVNNERQAQLIDGSTPLQNSTGLAVGGVLEVDGVTYVVLPGPPSELKPM
VWDYLVPLLSSDHKQLYSRVLRFFGIGESQLVTVLSDLIENQTDPTIAPYAKTGEVTLRLSTKADDLETAKAKLDELEHK
ILAKKTLNSIPLENLLYGYGDDNSMARVVFDLLKQKHKTITAAESLTAGLFQSSIADFPGSSAVFNGGFVTYSIEEKAKM
LQIPLKDLQEHGVVSHFTAEKMAEQSRLLTDADFGIGLTGVAGPDGLEGHPAGTVFIGIATKEKVHSIRVVIGGRSRSDV
RHIACLYAFNLVRQALLQD

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=568282 KIP81_RS09395 WP_074629880.1 1899611..1900870(-) (cinA) [Streptococcus equinus strain SheepZ001]
ATGAAAGCTGAAATCATTGCTGTTGGAACAGAGATTTTAACAGGACAAATCACAAATACGAATGCACAATTTCTATCAGA
GGAATTTGCTAAGTTAGGGATTGATGTCTTTTTCCAAACGGCAGTTGGGGACAATGAAGAACGTCTGCTGTCTACCATTG
ATTTGGCAAGTAAACGCAGTGATTTAGTTGTTCTTTGCGGTGGTTTAGGACCAACCGAAGATGATTTGACAAAACAAACT
TTGGCAAAATATTTAGGACGTAACTTGGTTTTTGATGAACAGGCAAGTAAACGTTTGGATGAATTCTTTGCGACACGTCC
GCAATTTACAAGAACAGTTAACAATGAACGTCAGGCTCAATTGATTGATGGGTCAACACCTCTTCAAAATAGTACGGGAC
TTGCTGTAGGTGGTGTTCTGGAAGTTGATGGTGTTACTTATGTCGTTCTTCCTGGACCACCAAGTGAATTAAAGCCTATG
GTTTGGGACTATTTAGTGCCATTGCTATCTAGTGACCACAAGCAATTGTATTCACGTGTCTTACGTTTCTTTGGTATCGG
GGAAAGTCAGTTGGTAACAGTTTTGTCAGATTTGATTGAAAATCAAACAGACCCAACAATCGCTCCATATGCCAAAACAG
GTGAAGTGACACTTAGATTGTCAACGAAGGCTGATGACCTTGAAACAGCTAAGGCTAAGTTGGATGAGCTTGAGCATAAG
ATTCTTGCTAAGAAGACTTTAAATAGTATTCCGCTTGAAAATTTGCTTTATGGATACGGTGATGATAATAGTATGGCGCG
TGTTGTTTTTGATTTACTTAAGCAAAAACACAAGACTATTACGGCTGCAGAAAGTTTGACAGCTGGTCTGTTTCAATCAA
GTATTGCTGATTTTCCAGGCTCTTCAGCAGTTTTTAATGGTGGTTTTGTGACTTATAGCATTGAAGAAAAGGCAAAAATG
CTTCAAATCCCTTTAAAAGATTTACAAGAACATGGGGTTGTGAGTCATTTTACAGCTGAAAAAATGGCTGAGCAGTCACG
ATTGCTGACAGATGCTGATTTTGGAATTGGCTTAACAGGAGTTGCTGGTCCAGATGGTCTAGAAGGTCATCCAGCGGGAA
CAGTTTTCATAGGTATTGCTACAAAAGAAAAAGTTCATTCTATCCGTGTTGTTATAGGTGGACGAAGCCGTTCAGATGTG
CGTCATATTGCATGTTTGTATGCTTTTAACTTAGTACGTCAAGCTTTATTACAAGACTAA

Domains

Predicted by InterproScan.

Probable molybdopterin binding domain (MoCF_biosynth)

(5-169)

Competence-damaged protein (CinA)

(263-415)

Damage-inducible protein CinA KH domain (CinA_KH)

(178-241)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Streptococcus mutans UA159

72.182

99.523

0.718
  cinA Streptococcus mitis SK321

71.122

100

0.711
  cinA Streptococcus mitis NCTC 12261

70.406

100

0.704
  cinA Streptococcus pneumoniae Rx1

69.212

100

0.692
  cinA Streptococcus pneumoniae TIGR4

69.212

100

0.692
  cinA Streptococcus pneumoniae R6

69.212

100

0.692
  cinA Streptococcus pneumoniae D39

68.974

100

0.69
  cinA Streptococcus suis isolate S10

53.846

99.284

0.535
  cinA Bacillus subtilis subsp. subtilis str. 168

45.261

100

0.456