Detailed information
Bioinformatically predicted
Overview
| Name | cinA | Type | Machinery gene |
| Locus tag | KFU59_RS02570 | Genome accession | NZ_CP073915 |
| Coordinates | 537747..538988 (+) | Length | 413 a.a. |
| NCBI ID | WP_005688669.1 | Uniprot ID | A0A508YV25 |
| Organism | Lacticaseibacillus rhamnosus strain AS | ||
| Function | facilitate localization of RecA (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 529820..578716 | 537747..538988 | within | 0 |
Gene organization within MGE regions
Location: 529820..578716
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KFU59_RS02540 (KFU59_02540) | - | 530318..532618 (+) | 2301 | WP_211751595.1 | DNA translocase FtsK | - |
| KFU59_RS02545 (KFU59_02545) | - | 532627..533889 (+) | 1263 | WP_015764371.1 | pitrilysin family protein | - |
| KFU59_RS02550 (KFU59_02550) | - | 533886..535178 (+) | 1293 | WP_005688664.1 | pitrilysin family protein | - |
| KFU59_RS02555 (KFU59_02555) | - | 535178..535906 (+) | 729 | WP_005688666.1 | SDR family oxidoreductase | - |
| KFU59_RS02560 (KFU59_02560) | - | 535993..536928 (+) | 936 | WP_015764372.1 | helix-turn-helix domain-containing protein | - |
| KFU59_RS02565 (KFU59_02565) | pgsA | 536925..537518 (+) | 594 | WP_015764373.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| KFU59_RS02570 (KFU59_02570) | cinA | 537747..538988 (+) | 1242 | WP_005688669.1 | competence/damage-inducible protein A | Machinery gene |
| KFU59_RS02575 (KFU59_02575) | recA | 539040..540092 (+) | 1053 | WP_005688671.1 | recombinase RecA | Machinery gene |
| KFU59_RS02580 (KFU59_02580) | rny | 540717..542288 (+) | 1572 | WP_005684479.1 | ribonuclease Y | - |
| KFU59_RS02585 (KFU59_02585) | - | 542377..543033 (-) | 657 | WP_024129572.1 | YigZ family protein | - |
| KFU59_RS02590 (KFU59_02590) | - | 543061..544326 (+) | 1266 | WP_014571217.1 | DEAD/DEAH box helicase | - |
| KFU59_RS02595 (KFU59_02595) | - | 544485..545003 (+) | 519 | WP_005688681.1 | ComF family protein | - |
| KFU59_RS02600 (KFU59_02600) | raiA | 545194..545751 (+) | 558 | WP_005684485.1 | ribosome-associated translation inhibitor RaiA | - |
| KFU59_RS02610 (KFU59_02610) | secA | 546335..548698 (+) | 2364 | WP_005688686.1 | preprotein translocase subunit SecA | - |
| KFU59_RS02615 (KFU59_02615) | prfB | 548839..549955 (+) | 1117 | WP_154243967.1 | peptide chain release factor 2 | - |
| KFU59_RS02620 (KFU59_02620) | ftsE | 550032..550718 (+) | 687 | WP_005684489.1 | cell division ATP-binding protein FtsE | - |
| KFU59_RS02625 (KFU59_02625) | ftsX | 550708..551595 (+) | 888 | WP_005684490.1 | permease-like cell division protein FtsX | - |
| KFU59_RS02630 (KFU59_02630) | - | 551866..552963 (+) | 1098 | WP_211751597.1 | PDZ domain-containing protein | - |
| KFU59_RS02635 (KFU59_02635) | - | 552960..553664 (+) | 705 | WP_005688690.1 | response regulator transcription factor | - |
| KFU59_RS02640 (KFU59_02640) | - | 553657..555324 (+) | 1668 | WP_005688691.1 | ATP-binding protein | - |
| KFU59_RS02645 (KFU59_02645) | - | 555414..556280 (+) | 867 | WP_005688693.1 | phosphate ABC transporter substrate-binding protein PstS family protein | - |
| KFU59_RS02650 (KFU59_02650) | pstC | 556428..557351 (+) | 924 | WP_005684497.1 | phosphate ABC transporter permease subunit PstC | - |
| KFU59_RS02655 (KFU59_02655) | pstA | 557348..558232 (+) | 885 | WP_005684499.1 | phosphate ABC transporter permease PstA | - |
| KFU59_RS02660 (KFU59_02660) | pstB | 558303..559121 (+) | 819 | WP_014571222.1 | phosphate ABC transporter ATP-binding protein PstB | - |
| KFU59_RS02665 (KFU59_02665) | pstB | 559131..559895 (+) | 765 | WP_005684501.1 | phosphate ABC transporter ATP-binding protein PstB | - |
| KFU59_RS02670 (KFU59_02670) | phoU | 559906..560583 (+) | 678 | WP_005684502.1 | phosphate signaling complex protein PhoU | - |
| KFU59_RS02675 (KFU59_02675) | - | 560836..561735 (-) | 900 | WP_014569362.1 | IS3 family transposase | - |
| KFU59_RS02680 (KFU59_02680) | - | 561711..562439 (-) | 729 | WP_014569363.1 | helix-turn-helix domain-containing protein | - |
| KFU59_RS02685 (KFU59_02685) | liaX | 563008..564498 (+) | 1491 | WP_211751598.1 | daptomycin-sensing surface protein LiaX | - |
| KFU59_RS02690 (KFU59_02690) | - | 564510..564770 (+) | 261 | WP_005688700.1 | hypothetical protein | - |
| KFU59_RS02695 (KFU59_02695) | - | 564773..565108 (+) | 336 | WP_005684507.1 | phage holin family protein | - |
| KFU59_RS02700 (KFU59_02700) | hprK | 565376..566335 (+) | 960 | WP_005684508.1 | HPr(Ser) kinase/phosphatase | - |
| KFU59_RS02705 (KFU59_02705) | lgt | 566337..567164 (+) | 828 | WP_005684509.1 | prolipoprotein diacylglyceryl transferase | - |
| KFU59_RS02710 (KFU59_02710) | - | 567175..568230 (+) | 1056 | WP_015764377.1 | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | - |
| KFU59_RS02715 (KFU59_02715) | trxB | 568296..569243 (+) | 948 | WP_005684511.1 | thioredoxin-disulfide reductase | - |
| KFU59_RS02720 (KFU59_02720) | - | 569495..571222 (+) | 1728 | WP_014569367.1 | phospho-sugar mutase | - |
| KFU59_RS02725 (KFU59_02725) | - | 571681..572328 (+) | 648 | WP_005688713.1 | YfbR-like 5'-deoxynucleotidase | - |
| KFU59_RS02730 (KFU59_02730) | uvrB | 572599..574614 (+) | 2016 | WP_005688715.1 | excinuclease ABC subunit UvrB | - |
| KFU59_RS02735 (KFU59_02735) | uvrA | 574795..577689 (+) | 2895 | WP_211751600.1 | excinuclease ABC subunit UvrA | - |
| KFU59_RS02740 (KFU59_02740) | - | 577891..578430 (+) | 540 | WP_005688718.1 | DUF308 domain-containing protein | - |
Sequence
Protein
Download Length: 413 a.a. Molecular weight: 44384.10 Da Isoelectric Point: 8.3237
>NTDB_id=562233 KFU59_RS02570 WP_005688669.1 537747..538988(+) (cinA) [Lacticaseibacillus rhamnosus strain AS]
MQAEIIAIGTEILMGQITNTNGAYMAKQLATLGIASYHQQVVGDNAKRLADAISLAEQRSDIVILIGGLGPTPDDLTKQT
LAAHLNLPLVEDAGAMAKLAARVKQQQRPMTPNNRLQAMYPKGAIVLANRVGLAVGAWVEQRQHAYVLLPGPPKEFVPMV
DHELLPRLAKYSGHQEVLESRVMRFFGVGESQLVTDLSDLIANQTNPTLATYIKDHEVTVRVTASGKTQAEAAAKLEPMI
GIIMDREGRYFYGYGDDNSLAQELVKALAASDKQISAAESLTAGAFQAALGDVPGVSAYFKGGFVTYALATKAAFLNIDA
RQLAEHGVVSEFTAKAMAEHARQRAAADIAVSFTGVAGPDKLEGQPAGTVWIGLARLGEKPIAQVYHFPGGRNDVRKRAV
MTGMMMVLKRLRE
MQAEIIAIGTEILMGQITNTNGAYMAKQLATLGIASYHQQVVGDNAKRLADAISLAEQRSDIVILIGGLGPTPDDLTKQT
LAAHLNLPLVEDAGAMAKLAARVKQQQRPMTPNNRLQAMYPKGAIVLANRVGLAVGAWVEQRQHAYVLLPGPPKEFVPMV
DHELLPRLAKYSGHQEVLESRVMRFFGVGESQLVTDLSDLIANQTNPTLATYIKDHEVTVRVTASGKTQAEAAAKLEPMI
GIIMDREGRYFYGYGDDNSLAQELVKALAASDKQISAAESLTAGAFQAALGDVPGVSAYFKGGFVTYALATKAAFLNIDA
RQLAEHGVVSEFTAKAMAEHARQRAAADIAVSFTGVAGPDKLEGQPAGTVWIGLARLGEKPIAQVYHFPGGRNDVRKRAV
MTGMMMVLKRLRE
Nucleotide
Download Length: 1242 bp
>NTDB_id=562233 KFU59_RS02570 WP_005688669.1 537747..538988(+) (cinA) [Lacticaseibacillus rhamnosus strain AS]
ATGCAAGCAGAAATTATTGCTATCGGAACGGAAATTCTGATGGGACAAATCACAAATACAAATGGCGCGTATATGGCTAA
ACAACTGGCTACATTAGGTATTGCAAGCTATCATCAACAGGTTGTTGGGGATAACGCAAAACGACTGGCTGACGCGATAA
GTTTGGCTGAACAACGCAGTGATATCGTTATTTTGATTGGCGGTTTAGGACCAACACCGGATGATTTAACGAAGCAAACC
CTAGCCGCACACCTGAATTTACCCTTGGTGGAAGACGCTGGCGCTATGGCCAAGTTGGCTGCGCGGGTTAAACAACAGCA
ACGTCCAATGACACCCAATAATCGCTTGCAAGCGATGTATCCCAAAGGCGCAATCGTATTGGCCAATCGTGTTGGGTTGG
CGGTCGGCGCATGGGTTGAGCAGCGCCAACACGCCTATGTTTTATTGCCGGGACCACCTAAAGAGTTTGTGCCAATGGTT
GATCATGAACTGTTGCCACGACTGGCAAAATATAGCGGGCATCAAGAAGTTTTGGAAAGTCGCGTGATGCGTTTCTTTGG
TGTCGGCGAATCGCAACTTGTGACAGATTTAAGTGATTTAATTGCCAACCAGACGAATCCGACACTTGCAACTTATATAA
AAGATCATGAGGTGACAGTTCGGGTAACTGCGAGTGGCAAAACACAAGCAGAAGCCGCGGCAAAACTTGAGCCAATGATC
GGCATCATTATGGATCGTGAAGGCCGCTACTTTTACGGCTACGGTGACGATAACAGTCTTGCTCAGGAATTAGTCAAAGC
ATTGGCGGCTAGTGATAAGCAAATTAGTGCCGCTGAAAGCCTGACTGCAGGTGCATTTCAAGCGGCATTGGGAGACGTTC
CGGGAGTCTCGGCTTATTTCAAAGGCGGCTTCGTTACGTACGCTTTAGCGACAAAAGCTGCATTTTTAAATATCGATGCC
CGTCAGCTAGCAGAACATGGTGTGGTGAGTGAATTTACTGCCAAAGCAATGGCAGAGCATGCTCGTCAACGAGCCGCGGC
AGACATTGCCGTTAGTTTTACCGGAGTTGCCGGTCCTGACAAGCTGGAAGGACAGCCAGCCGGCACCGTCTGGATTGGTT
TGGCGCGGTTAGGAGAGAAACCAATAGCACAAGTTTATCATTTTCCGGGTGGGCGAAATGACGTCCGCAAGCGCGCCGTT
ATGACGGGGATGATGATGGTGTTGAAGCGTTTACGCGAATAA
ATGCAAGCAGAAATTATTGCTATCGGAACGGAAATTCTGATGGGACAAATCACAAATACAAATGGCGCGTATATGGCTAA
ACAACTGGCTACATTAGGTATTGCAAGCTATCATCAACAGGTTGTTGGGGATAACGCAAAACGACTGGCTGACGCGATAA
GTTTGGCTGAACAACGCAGTGATATCGTTATTTTGATTGGCGGTTTAGGACCAACACCGGATGATTTAACGAAGCAAACC
CTAGCCGCACACCTGAATTTACCCTTGGTGGAAGACGCTGGCGCTATGGCCAAGTTGGCTGCGCGGGTTAAACAACAGCA
ACGTCCAATGACACCCAATAATCGCTTGCAAGCGATGTATCCCAAAGGCGCAATCGTATTGGCCAATCGTGTTGGGTTGG
CGGTCGGCGCATGGGTTGAGCAGCGCCAACACGCCTATGTTTTATTGCCGGGACCACCTAAAGAGTTTGTGCCAATGGTT
GATCATGAACTGTTGCCACGACTGGCAAAATATAGCGGGCATCAAGAAGTTTTGGAAAGTCGCGTGATGCGTTTCTTTGG
TGTCGGCGAATCGCAACTTGTGACAGATTTAAGTGATTTAATTGCCAACCAGACGAATCCGACACTTGCAACTTATATAA
AAGATCATGAGGTGACAGTTCGGGTAACTGCGAGTGGCAAAACACAAGCAGAAGCCGCGGCAAAACTTGAGCCAATGATC
GGCATCATTATGGATCGTGAAGGCCGCTACTTTTACGGCTACGGTGACGATAACAGTCTTGCTCAGGAATTAGTCAAAGC
ATTGGCGGCTAGTGATAAGCAAATTAGTGCCGCTGAAAGCCTGACTGCAGGTGCATTTCAAGCGGCATTGGGAGACGTTC
CGGGAGTCTCGGCTTATTTCAAAGGCGGCTTCGTTACGTACGCTTTAGCGACAAAAGCTGCATTTTTAAATATCGATGCC
CGTCAGCTAGCAGAACATGGTGTGGTGAGTGAATTTACTGCCAAAGCAATGGCAGAGCATGCTCGTCAACGAGCCGCGGC
AGACATTGCCGTTAGTTTTACCGGAGTTGCCGGTCCTGACAAGCTGGAAGGACAGCCAGCCGGCACCGTCTGGATTGGTT
TGGCGCGGTTAGGAGAGAAACCAATAGCACAAGTTTATCATTTTCCGGGTGGGCGAAATGACGTCCGCAAGCGCGCCGTT
ATGACGGGGATGATGATGGTGTTGAAGCGTTTACGCGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| cinA | Streptococcus mitis SK321 |
51.781 |
100 |
0.528 |
| cinA | Streptococcus mitis NCTC 12261 |
51.781 |
100 |
0.528 |
| cinA | Streptococcus pneumoniae TIGR4 |
51.306 |
100 |
0.523 |
| cinA | Streptococcus pneumoniae Rx1 |
50.831 |
100 |
0.518 |
| cinA | Streptococcus pneumoniae R6 |
50.831 |
100 |
0.518 |
| cinA | Streptococcus pneumoniae D39 |
50.594 |
100 |
0.516 |
| cinA | Streptococcus mutans UA159 |
51.202 |
100 |
0.516 |
| cinA | Bacillus subtilis subsp. subtilis str. 168 |
44.417 |
99.758 |
0.443 |
| cinA | Streptococcus suis isolate S10 |
41.534 |
91.525 |
0.38 |