Detailed information NTG0558410

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: KCV09_RS13290
• Genome accession: NZ_CP073241
• Coordinates: 2896684..2897754 (+)
• Length: 356 a.a.
• NCBI ID: WP_004934220.1
• Uniprot ID: A0A0M1I9S5
• Organism: Acinetobacter soli strain M3-1-68
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2891684..2902754

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KCV09_RS13275	mraY	2891971..2893089 (+)	1119	WP_004934213.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-
KCV09_RS13280	-	2893148..2893969 (+)	822	WP_212515263.1	putative RNA methyltransferase	-
KCV09_RS13285	ponA	2893986..2896517 (-)	2532	WP_212515264.1	penicillin-binding protein PBP1a	-
KCV09_RS13290	comM	2896684..2897754 (+)	1071	WP_004934220.1	pilus assembly protein PilM	Machinery gene
KCV09_RS13295	comN	2897741..2898379 (+)	639	WP_212515777.1	PilN domain-containing protein	Machinery gene
KCV09_RS13300	comO	2898376..2899110 (+)	735	WP_004944972.1	type 4a pilus biogenesis protein PilO	Machinery gene
KCV09_RS13305	comL	2899110..2899634 (+)	525	WP_004934225.1	pilus assembly protein PilP	Machinery gene
KCV09_RS13310	comQ	2899694..2901790 (+)	2097	WP_208476756.1	type IV pilus secretin PilQ family protein	Machinery gene
KCV09_RS13315	aroK	2901827..2902369 (+)	543	WP_004944978.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 39426.93 Da
• Isoelectric Point: 4.5627

>NTDB_id=558410 KCV09_RS13290 WP_004934220.1 2896684..2897754(+) (comM) [Acinetobacter soli strain M3-1-68]
MLRLYRKTNKGLVGVDISSTSVKVLELSAKNDRYCVESYGLIPLQESSVVEKNILNPEAVADALTRAINLANPQATQAAI
AVPTSMVVHKLIEMDADMTDDEREVQIRMDAERFIPFPLDEVSLDFEVTPERPANPNRVNVLIAATRTENVDTRVEVLEL
AGLTPKVADVESYAMERAFQVFADTLPMGVSTVGILDIGHTMTTLSVMQKGKIIYTREQVFGGKQLTQDVQKRYGMSYEE
AGRAKKDGSLPEDFTAEVFEPYLEALVQQAARSLQFFFSSSQYNEIDHILLAGGNANIPGLARLLQQKLGYRVTVANPFL
QMDFSPQVDVRKIENDAASLMVACGLALRSFDDDTH

Nucleotide

• Length: 1071 bp

>NTDB_id=558410 KCV09_RS13290 WP_004934220.1 2896684..2897754(+) (comM) [Acinetobacter soli strain M3-1-68]
GTGCTCAGATTATACCGTAAAACCAATAAGGGGTTGGTTGGGGTTGATATCAGTTCGACTTCGGTCAAAGTACTCGAGCT
CTCTGCCAAAAATGATCGTTACTGTGTAGAAAGTTATGGCTTGATTCCGCTGCAAGAAAGCAGTGTGGTTGAGAAAAATA
TTCTTAATCCTGAAGCGGTGGCCGACGCATTGACGCGCGCCATCAATCTGGCCAATCCACAAGCGACCCAAGCGGCCATT
GCAGTGCCCACCTCAATGGTCGTACACAAACTGATCGAAATGGATGCCGACATGACCGATGATGAGCGAGAAGTTCAGAT
TCGAATGGATGCCGAGCGTTTTATTCCATTTCCTTTAGATGAAGTCAGTCTTGATTTTGAAGTCACGCCAGAACGCCCAG
CCAATCCTAATCGGGTCAATGTCCTGATTGCAGCGACACGTACCGAAAATGTCGATACGCGTGTTGAAGTGCTGGAGCTG
GCAGGTTTAACGCCTAAGGTGGCAGATGTTGAAAGCTATGCCATGGAGCGTGCATTTCAGGTTTTTGCCGATACCTTGCC
GATGGGCGTAAGTACGGTGGGAATTTTAGATATTGGCCATACCATGACCACGCTGTCGGTGATGCAAAAGGGCAAGATTA
TCTATACCCGCGAGCAGGTTTTTGGCGGTAAACAACTCACTCAAGACGTTCAAAAACGCTATGGAATGTCTTATGAAGAA
GCAGGACGTGCCAAAAAAGACGGCTCGTTGCCCGAGGATTTTACCGCAGAAGTGTTTGAGCCCTATCTAGAAGCGCTGGT
TCAGCAGGCGGCGCGTTCATTACAGTTTTTCTTTTCATCTTCGCAGTACAACGAAATTGACCATATTTTGCTCGCAGGCG
GAAATGCCAATATTCCGGGGCTAGCCCGATTGTTACAGCAAAAACTGGGCTATCGGGTGACGGTGGCCAATCCGTTTTTA
CAAATGGATTTTTCACCACAGGTGGATGTTCGCAAGATCGAAAATGATGCTGCATCGCTCATGGTGGCATGTGGGCTGGC
CTTGAGGAGTTTCGATGATGACACGCATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: A0A0M1I9S5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter baylyi ADP1	90.652	99.157	0.899
pilM	Acinetobacter baumannii D1279779	82.386	98.876	0.815
comM	Acinetobacter nosocomialis M2	81.818	98.876	0.809
pilM	Legionella pneumophila strain ERS1305867	42.373	99.438	0.421