Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | CYAN10605_RS14695 | Genome accession | NC_019776 |
| Coordinates | 3507841..3508206 (-) | Length | 121 a.a. |
| NCBI ID | WP_015220734.1 | Uniprot ID | A0AAF0ZCG7 |
| Organism | Cyanobacterium aponinum PCC 10605 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3502841..3513206
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CYAN10605_RS14680 (Cyan10605_2950) | - | 3503360..3504124 (-) | 765 | WP_015220731.1 | MlaE family lipid ABC transporter permease subunit | - |
| CYAN10605_RS14685 (Cyan10605_2951) | pilJ | 3504232..3506991 (-) | 2760 | WP_015220732.1 | methyl-accepting chemotaxis protein | Machinery gene |
| CYAN10605_RS14690 (Cyan10605_2952) | - | 3507057..3507593 (-) | 537 | WP_015220733.1 | chemotaxis protein CheW | - |
| CYAN10605_RS14695 (Cyan10605_2953) | pilH | 3507841..3508206 (-) | 366 | WP_015220734.1 | response regulator transcription factor | Machinery gene |
| CYAN10605_RS14700 (Cyan10605_2954) | hpnH | 3508439..3509452 (-) | 1014 | WP_015220735.1 | adenosyl-hopene transferase HpnH | - |
| CYAN10605_RS14705 (Cyan10605_2955) | murA | 3509536..3510840 (-) | 1305 | WP_083887266.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| CYAN10605_RS14710 (Cyan10605_2956) | ruvX | 3511548..3511979 (-) | 432 | WP_015220737.1 | Holliday junction resolvase RuvX | - |
| CYAN10605_RS14715 (Cyan10605_2957) | pgsA | 3512021..3512560 (-) | 540 | WP_015220738.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13740.16 Da Isoelectric Point: 7.7809
>NTDB_id=55045 CYAN10605_RS14695 WP_015220734.1 3507841..3508206(-) (pilH) [Cyanobacterium aponinum PCC 10605]
MSTVLLVEDSIPTRKMISELLTKQGFNVEVATDGIQALEVLPNLRPDLVILDIIMPKMNGYEVCRKIKSDPQTKDLPVII
CSSKGEDFDRYWGIKQGADAYIAKPFREKELIATIKQFLKR
MSTVLLVEDSIPTRKMISELLTKQGFNVEVATDGIQALEVLPNLRPDLVILDIIMPKMNGYEVCRKIKSDPQTKDLPVII
CSSKGEDFDRYWGIKQGADAYIAKPFREKELIATIKQFLKR
Nucleotide
Download Length: 366 bp
>NTDB_id=55045 CYAN10605_RS14695 WP_015220734.1 3507841..3508206(-) (pilH) [Cyanobacterium aponinum PCC 10605]
ATGAGTACAGTGTTACTTGTCGAAGATAGTATTCCGACAAGAAAAATGATTTCTGAACTATTAACCAAACAAGGTTTTAA
CGTAGAGGTAGCTACTGATGGAATTCAAGCCTTAGAAGTATTACCTAATCTTCGCCCTGATTTGGTTATATTGGATATTA
TCATGCCTAAAATGAATGGTTACGAAGTATGTCGTAAAATAAAATCTGATCCCCAAACCAAAGATTTACCTGTCATAATT
TGTTCATCAAAAGGAGAAGACTTCGATCGCTATTGGGGTATCAAACAAGGGGCGGATGCCTACATAGCCAAACCTTTCAG
AGAAAAAGAATTAATTGCTACTATTAAACAATTTTTAAAAAGATAA
ATGAGTACAGTGTTACTTGTCGAAGATAGTATTCCGACAAGAAAAATGATTTCTGAACTATTAACCAAACAAGGTTTTAA
CGTAGAGGTAGCTACTGATGGAATTCAAGCCTTAGAAGTATTACCTAATCTTCGCCCTGATTTGGTTATATTGGATATTA
TCATGCCTAAAATGAATGGTTACGAAGTATGTCGTAAAATAAAATCTGATCCCCAAACCAAAGATTTACCTGTCATAATT
TGTTCATCAAAAGGAGAAGACTTCGATCGCTATTGGGGTATCAAACAAGGGGCGGATGCCTACATAGCCAAACCTTTCAG
AGAAAAAGAATTAATTGCTACTATTAAACAATTTTTAAAAAGATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
65.833 |
99.174 |
0.653 |
| scnR | Streptococcus mutans UA159 |
39.344 |
100 |
0.397 |
| pilL-C | Synechocystis sp. PCC 6803 |
38.655 |
98.347 |
0.38 |
| micA | Streptococcus pneumoniae Cp1015 |
37.19 |
100 |
0.372 |
| vicR | Streptococcus mutans UA159 |
36.364 |
100 |
0.364 |
| chpA | Acinetobacter baumannii strain A118 |
37.931 |
95.868 |
0.364 |
| chiS | Vibrio cholerae strain A1552 |
38.938 |
93.388 |
0.364 |