Detailed information NTG0548652

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: JN057_RS10035
• Genome accession: NZ_CP071871
• Coordinates: 1928032..1928436 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588020.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain BVJ1JL
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1923032..1933436

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JN057_RS10000 (JN057_02050)	rnpA	1923446..1923817 (-)	372	WP_000739246.1	ribonuclease P protein component	-
JN057_RS11610	-	1923834..1923965 (-)	132	WP_000768904.1	hypothetical protein	-
JN057_RS10005 (JN057_02051)	-	1923966..1925156 (-)	1191	WP_000167766.1	acetate kinase	-
JN057_RS10010 (JN057_02052)	comYH	1925207..1926160 (-)	954	WP_000345116.1	class I SAM-dependent methyltransferase	Machinery gene
JN057_RS10015	-	1926221..1926815 (-)	595	Protein_1964	class I SAM-dependent methyltransferase	-
JN057_RS10020 (JN057_02054)	comGG/cglG	1926952..1927365 (-)	414	WP_061370822.1	competence type IV pilus minor pilin ComGG	Machinery gene
JN057_RS10025 (JN057_02055)	comGF/cglF	1927343..1927804 (-)	462	WP_000250531.1	competence type IV pilus minor pilin ComGF	Machinery gene
JN057_RS10030 (JN057_02056)	comGE/cglE	1927767..1928069 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
JN057_RS10035 (JN057_02057)	comGD/cglD	1928032..1928436 (-)	405	WP_000588020.1	competence type IV pilus minor pilin ComGD	Machinery gene
JN057_RS10040 (JN057_02058)	comGC/cglC	1928429..1928755 (-)	327	WP_000738633.1	comG operon protein ComGC	Machinery gene
JN057_RS10045 (JN057_02059)	comGB/cglB	1928757..1929773 (-)	1017	WP_001844679.1	competence type IV pilus assembly protein ComGB	Machinery gene
JN057_RS10050 (JN057_02060)	comGA/cglA/cilD	1929721..1930662 (-)	942	WP_000249571.1	competence type IV pilus ATPase ComGA	Machinery gene
JN057_RS10055 (JN057_02061)	-	1930738..1931103 (-)	366	WP_000286415.1	DUF1033 family protein	-
JN057_RS10060 (JN057_02062)	-	1931254..1932312 (-)	1059	WP_000649471.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14662.89 Da
• Isoelectric Point: 10.2164

>NTDB_id=548652 JN057_RS10035 WP_000588020.1 1928032..1928436(-) (comGD/cglD) [Streptococcus pneumoniae strain BVJ1JL]
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQTISNGSQKLPV
PKGIQVPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=548652 JN057_RS10035 WP_000588020.1 1928032..1928436(-) (comGD/cglD) [Streptococcus pneumoniae strain BVJ1JL]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGTCTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTTCAGTCCACTTTTGCGGCAGTAGAGGAACAGATTTTCTTTATGGAATTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTGAACTTAGATGGGCAGACGATTAGCAATGGCAGTCAAAAGTTGCCAGTC
CCTAAAGGAATTCAGGTCCCATCAGGCCAAAGTATTACATTTGACCGTGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae Rx1	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae D39	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae R6	97.015	100	0.97
comGD/cglD	Streptococcus mitis SK321	96.269	100	0.963
comGD/cglD	Streptococcus mitis NCTC 12261	96.992	99.254	0.963
comYD	Streptococcus gordonii str. Challis substr. CH1	59.055	94.776	0.56
comYD	Streptococcus mutans UA140	50	95.522	0.478
comYD	Streptococcus mutans UA159	50	95.522	0.478