Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   SPYJRS4_RS06010 Genome accession   NZ_AP012335
Coordinates   1219726..1219908 (-) Length   60 a.a.
NCBI ID   WP_011018104.1    Uniprot ID   -
Organism   Streptococcus pyogenes JRS4     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1214726..1224908
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPYJRS4_RS06000 (SPYJRS4_1264) rocA 1216159..1217514 (-) 1356 WP_011184792.1 transcriptional regulator RocA -
  SPYJRS4_RS06005 (SPYJRS4_1265) rlmD 1218180..1219535 (-) 1356 WP_011184793.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  SPYJRS4_RS06010 (SPYJRS4_1266) prx 1219726..1219908 (-) 183 WP_011018104.1 hypothetical protein Regulator
  SPYJRS4_RS06015 (SPYJRS4_1267) sda 1220148..1221146 (+) 999 WP_032463908.1 streptodornase A -
  SPYJRS4_RS06020 (SPYJRS4_1268) - 1221287..1221880 (-) 594 WP_003051628.1 GNAT family N-acetyltransferase -
  SPYJRS4_RS06025 (SPYJRS4_1269) - 1221880..1222044 (-) 165 WP_021340366.1 hypothetical protein -
  SPYJRS4_RS06030 (SPYJRS4_1270) - 1222193..1223398 (-) 1206 WP_023078214.1 glucosaminidase domain-containing protein -
  SPYJRS4_RS06035 (SPYJRS4_1272) - 1223511..1223696 (-) 186 WP_011184796.1 holin -
  SPYJRS4_RS06040 (SPYJRS4_1273) - 1223693..1223992 (-) 300 WP_011184797.1 hypothetical protein -
  SPYJRS4_RS06045 (SPYJRS4_1274) - 1224003..1224620 (-) 618 WP_011018111.1 DUF1366 domain-containing protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6935.81 Da        Isoelectric Point: 3.9417

>NTDB_id=54863 SPYJRS4_RS06010 WP_011018104.1 1219726..1219908(-) (prx) [Streptococcus pyogenes JRS4]
MLTYDEFKQAIDNGYITADTVMIVRKNGQIFDYVLPHEEARNGEVVTEEVVEEVMVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=54863 SPYJRS4_RS06010 WP_011018104.1 1219726..1219908(-) (prx) [Streptococcus pyogenes JRS4]
ATGCTAACATACGACGAATTTAAGCAAGCGATTGACAATGGATATATCACAGCAGACACAGTTATGATCGTGCGTAAAAA
CGGACAGATTTTTGATTATGTGTTGCCGCATGAAGAAGCGAGAAATGGAGAAGTTGTGACCGAGGAGGTAGTGGAAGAAG
TGATGGTGGAATTAGACAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

83.333

100

0.833
  prx Streptococcus pyogenes MGAS315

83.333

100

0.833
  prx Streptococcus pyogenes MGAS315

81.667

100

0.817
  prx Streptococcus pyogenes MGAS315

81.667

100

0.817
  prx Streptococcus pyogenes MGAS8232

80

100

0.8
  prx Streptococcus pyogenes MGAS315

76.667

100

0.767
  prx Streptococcus pyogenes MGAS315

93.023

71.667

0.667

Multiple sequence alignment