Detailed information NTG0548012

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: CSB63_RS01485
• Genome accession: NZ_CP089060
• Coordinates: 264931..265500 (+)
• Length: 189 a.a.
• NCBI ID: WP_065972905.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain CH8
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 259931..270500

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CSB63_RS01455 (CSB63_0261)	-	260162..260812 (+)	651	WP_134973069.1	phosphatase PAP2 family protein	-
CSB63_RS01460 (CSB63_0262)	comR	261007..261906 (+)	900	WP_100262298.1	helix-turn-helix domain-containing protein	Regulator
CSB63_RS01465	-	262144..262440 (+)	297	Protein_238	cysteine peptidase family C39 domain-containing protein	-
CSB63_RS01470	comA	262606..263001 (+)	396	WP_252989162.1	ABC transporter transmembrane domain-containing protein	Regulator
CSB63_RS01475 (CSB63_0265)	comA	263085..263453 (+)	369	WP_255136094.1	ABC transporter transmembrane domain-containing protein	Regulator
CSB63_RS01480 (CSB63_0266)	-	263538..264713 (+)	1176	WP_159341049.1	IS256-like element IS1191 family transposase	-
CSB63_RS01485 (CSB63_0268)	comA	264931..265500 (+)	570	WP_065972905.1	ATP-binding cassette domain-containing protein	Regulator
CSB63_RS01490 (CSB63_0269)	-	265607..265939 (+)	333	WP_024704184.1	DUF805 domain-containing protein	-
CSB63_RS01495 (CSB63_0270)	-	266085..266564 (-)	480	WP_224107489.1	DUF4153 domain-containing protein	-
CSB63_RS01500 (CSB63_0272)	-	267006..267377 (-)	372	WP_224107488.1	hypothetical protein	-
CSB63_RS01505 (CSB63_0273)	-	267782..268297 (+)	516	WP_024704185.1	AmiS/UreI family transporter	-
CSB63_RS01510 (CSB63_0274)	-	268322..268624 (+)	303	WP_002886558.1	urease subunit gamma	-
CSB63_RS01515 (CSB63_0275)	-	268636..268947 (+)	312	WP_002886559.1	urease subunit beta	-

Sequence

Protein

• Length: 189 a.a.
• Molecular weight: 20681.65 Da
• Isoelectric Point: 6.8724

>NTDB_id=548012 CSB63_RS01485 WP_065972905.1 264931..265500(+) (comA) [Streptococcus thermophilus strain CH8]
MGQSSSGKTTLAKISSGYYTKSSGHVSLDKASISQAELRQLVTYVPQQTYVFMGTILENLLLGLEGEVDEHLILKVCEQA
DILADIQKMPLGFQTQVSEDGGLSGGQKQRLAIARALLSNQPILIFDEATSGLDRETESRVMANLSKLTRTMIFIAHRSS
VYQHVSRVVTMANGKLEAASPNFNPFQFI

Nucleotide

• Length: 570 bp

>NTDB_id=548012 CSB63_RS01485 WP_065972905.1 264931..265500(+) (comA) [Streptococcus thermophilus strain CH8]
ATGGGTCAGAGTAGTTCTGGGAAAACGACTTTAGCGAAGATTTCGTCAGGTTATTACACAAAATCTAGTGGTCATGTAAG
CCTAGACAAAGCTTCTATTAGCCAAGCGGAGTTGCGCCAGTTGGTGACCTATGTTCCACAACAGACCTATGTCTTTATGG
GAACAATATTAGAAAATTTATTGTTAGGCCTTGAAGGAGAAGTTGATGAGCATCTTATTCTGAAAGTCTGTGAACAAGCC
GATATTTTGGCTGATATTCAAAAGATGCCCCTAGGTTTTCAGACCCAAGTATCTGAAGATGGAGGTCTGTCTGGCGGTCA
AAAACAAAGATTAGCTATAGCAAGGGCTCTCTTGTCCAATCAACCAATCTTGATTTTTGATGAAGCTACAAGTGGTCTGG
ACAGGGAAACTGAAAGTAGAGTAATGGCCAATCTTTCTAAACTGACACGAACAATGATTTTCATTGCTCACCGTAGCAGT
GTCTACCAACATGTCAGTCGTGTAGTGACTATGGCAAATGGGAAGCTTGAAGCAGCTAGTCCCAACTTCAATCCATTCCA
GTTCATTTAA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (1-131)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus mitis SK321	50.556	95.238	0.481
comA	Streptococcus pneumoniae Rx1	50	95.238	0.476
comA	Streptococcus pneumoniae D39	50	95.238	0.476
comA	Streptococcus pneumoniae R6	50	95.238	0.476
comA	Streptococcus mitis NCTC 12261	49.444	95.238	0.471
comA	Streptococcus pneumoniae TIGR4	49.444	95.238	0.471
comA	Streptococcus gordonii str. Challis substr. CH1	48.889	95.238	0.466
comA/nlmT	Streptococcus mutans UA159	46.667	95.238	0.444