Detailed information NTG0547029

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: J1N58_RS00810
• Genome accession: NZ_CP071697
• Coordinates: 139515..139949 (+)
• Length: 144 a.a.
• NCBI ID: WP_024376293.1
• Uniprot ID: -
• Organism: Streptococcus suis strain 1112S
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 134515..144949

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J1N58_RS00775 (J1N58_00775)	-	135261..135638 (+)	378	WP_029175711.1	DUF1033 family protein	-
J1N58_RS00780 (J1N58_00780)	-	135657..136607 (-)	951	WP_029175710.1	S66 peptidase family protein	-
J1N58_RS00785 (J1N58_00785)	comYA	136693..137643 (+)	951	WP_024376298.1	competence type IV pilus ATPase ComGA	Machinery gene
J1N58_RS00790 (J1N58_00790)	comYB	137555..138592 (+)	1038	WP_050571398.1	competence type IV pilus assembly protein ComGB	Machinery gene
J1N58_RS00795 (J1N58_00795)	comYC	138594..138875 (+)	282	WP_024376296.1	competence type IV pilus major pilin ComGC	Machinery gene
J1N58_RS00800 (J1N58_00800)	comGD	138856..139263 (+)	408	WP_024376295.1	competence type IV pilus minor pilin ComGD	-
J1N58_RS00805 (J1N58_00805)	comYE	139235..139528 (+)	294	WP_024376294.1	competence type IV pilus minor pilin ComGE	Machinery gene
J1N58_RS00810 (J1N58_00810)	comGF/cglF	139515..139949 (+)	435	WP_024376293.1	competence type IV pilus minor pilin ComGF	Machinery gene
J1N58_RS00815 (J1N58_00815)	comGG	139927..140442 (+)	516	WP_207560409.1	competence type IV pilus minor pilin ComGG	-
J1N58_RS00820 (J1N58_00820)	comYH	140499..141452 (+)	954	WP_024376291.1	class I SAM-dependent methyltransferase	Machinery gene
J1N58_RS00825 (J1N58_00825)	-	141503..142690 (+)	1188	WP_207560410.1	acetate kinase	-
J1N58_RS00830 (J1N58_00830)	-	143005..143556 (+)	552	WP_207560411.1	folate family ECF transporter S component	-
J1N58_RS00835 (J1N58_00835)	-	143612..144868 (+)	1257	WP_207560412.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16493.82 Da
• Isoelectric Point: 6.9839

>NTDB_id=547029 J1N58_RS00810 WP_024376293.1 139515..139949(+) (comGF/cglF) [Streptococcus suis strain 1112S]
MLKSKIPAFTLLECLVALVILSGSLLVFESLSKLLVQEAHYQGQTVQKEWLVFSSQLRSEWDRAELVKVENGKVYVNKGE
QDLAFGKSRSDDFRKTNDKGQGYQPMIYQVDSAAISQENQLVRIDFSFKNGEERTFIYAFKEKS

Nucleotide

• Length: 435 bp

>NTDB_id=547029 J1N58_RS00810 WP_024376293.1 139515..139949(+) (comGF/cglF) [Streptococcus suis strain 1112S]
TTGTTAAAAAGTAAAATTCCTGCTTTTACTCTCCTGGAATGCTTGGTAGCCTTAGTCATCCTATCAGGAAGTCTTCTGGT
CTTTGAAAGCTTGTCAAAACTGCTGGTCCAAGAAGCGCATTACCAAGGTCAGACTGTTCAAAAGGAATGGTTGGTCTTCT
CTAGTCAATTGCGGTCGGAGTGGGACCGGGCTGAATTGGTCAAGGTTGAAAATGGCAAGGTCTATGTCAACAAAGGCGAA
CAGGATTTGGCCTTTGGTAAGTCACGTTCGGATGATTTTCGGAAAACCAATGATAAGGGACAGGGCTACCAGCCTATGAT
TTATCAGGTGGACAGCGCAGCTATTTCCCAAGAAAACCAGCTGGTGCGCATCGACTTTAGCTTTAAAAACGGAGAGGAGC
GGACCTTTATCTATGCTTTTAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (37-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae TIGR4	53.901	97.917	0.528
comGF/cglF	Streptococcus pneumoniae Rx1	53.901	97.917	0.528
comGF/cglF	Streptococcus pneumoniae D39	53.901	97.917	0.528
comGF/cglF	Streptococcus pneumoniae R6	53.901	97.917	0.528
comGF/cglF	Streptococcus mitis NCTC 12261	54.478	93.056	0.507
comGF/cglF	Streptococcus mitis SK321	52.239	93.056	0.486
comYF	Streptococcus mutans UA140	48.611	100	0.486
comYF	Streptococcus mutans UA159	47.917	100	0.479
comGF	Lactococcus lactis subsp. cremoris KW2	46.099	97.917	0.451