Detailed information NTG0547030

Bioinformatically predicted

Overview

• Name: comYH
• Type: Machinery gene
• Locus tag: J1N58_RS00820
• Genome accession: NZ_CP071697
• Coordinates: 140499..141452 (+)
• Length: 317 a.a.
• NCBI ID: WP_024376291.1
• Uniprot ID: -
• Organism: Streptococcus suis strain 1112S
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 135499..146452

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J1N58_RS00780 (J1N58_00780)	-	135657..136607 (-)	951	WP_029175710.1	S66 peptidase family protein	-
J1N58_RS00785 (J1N58_00785)	comYA	136693..137643 (+)	951	WP_024376298.1	competence type IV pilus ATPase ComGA	Machinery gene
J1N58_RS00790 (J1N58_00790)	comYB	137555..138592 (+)	1038	WP_050571398.1	competence type IV pilus assembly protein ComGB	Machinery gene
J1N58_RS00795 (J1N58_00795)	comYC	138594..138875 (+)	282	WP_024376296.1	competence type IV pilus major pilin ComGC	Machinery gene
J1N58_RS00800 (J1N58_00800)	comGD	138856..139263 (+)	408	WP_024376295.1	competence type IV pilus minor pilin ComGD	-
J1N58_RS00805 (J1N58_00805)	comYE	139235..139528 (+)	294	WP_024376294.1	competence type IV pilus minor pilin ComGE	Machinery gene
J1N58_RS00810 (J1N58_00810)	comGF/cglF	139515..139949 (+)	435	WP_024376293.1	competence type IV pilus minor pilin ComGF	Machinery gene
J1N58_RS00815 (J1N58_00815)	comGG	139927..140442 (+)	516	WP_207560409.1	competence type IV pilus minor pilin ComGG	-
J1N58_RS00820 (J1N58_00820)	comYH	140499..141452 (+)	954	WP_024376291.1	class I SAM-dependent methyltransferase	Machinery gene
J1N58_RS00825 (J1N58_00825)	-	141503..142690 (+)	1188	WP_207560410.1	acetate kinase	-
J1N58_RS00830 (J1N58_00830)	-	143005..143556 (+)	552	WP_207560411.1	folate family ECF transporter S component	-
J1N58_RS00835 (J1N58_00835)	-	143612..144868 (+)	1257	WP_207560412.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35792.88 Da
• Isoelectric Point: 4.4133

>NTDB_id=547030 J1N58_RS00820 WP_024376291.1 140499..141452(+) (comYH) [Streptococcus suis strain 1112S]
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVADQHETDLIINNNKTLKQLDLTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVPTQKVTVLEIGSGTGNLAQTILNASQKDLDYLGIEVDDLLIDLSASIADVMQAE
ISFAQGDAVRPQILKESQIILADLPIGYYPDDQIASRYQVASSNEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARSLTPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI

Nucleotide

• Length: 954 bp

>NTDB_id=547030 J1N58_RS00820 WP_024376291.1 140499..141452(+) (comYH) [Streptococcus suis strain 1112S]
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGTTAGGTACCAA
TATCTATGATGCCATGATTGAGCAAAATGCTGCTTACGTAGCTGATCAGCATGAGACGGACCTTATTATCAATAATAACA
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTACCAATTCCTACTCATCAAGGCCAATCAGACT
GAACCCATGCAGTACAATCACCAGTTCACACCAGACTCTATCGGATTTATCCTATCTTTTCTAGTAGACCAATTGGTGCC
GACTCAAAAGGTGACGGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACCATCCTCAATGCCAGCCAGAAAG
ACTTGGACTATCTGGGGATTGAAGTAGATGATCTCTTGATTGATTTGTCGGCAAGTATTGCGGATGTCATGCAGGCAGAG
ATTTCTTTTGCCCAGGGCGATGCGGTACGTCCGCAGATTTTGAAGGAAAGCCAAATCATTCTTGCGGATTTGCCGATTGG
TTACTATCCAGATGACCAGATTGCCAGCCGTTATCAGGTTGCCAGTTCAAATGAACATACCTACGCCCACCATTTGCTAA
TGGAACAGTCCCTCAAATATTTGGAAAAGGATGGCTTTGCGATTTTGTTGGCTCCAAATGATTTATTGACTAGTCCGCAA
AGCGATTTGCTGAAAGGTTGGTTACAGGAGCAAGCCAATATTGTTGCCATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGATCGTTGACGCCGTTTGTTTATCCCTTGCAAA
GTCTTCAAGAACCAGAAGCTATTCAGAAGTTCATGCTCAATTTCAAAAATTGGAAGCAAGAAAATGCAATTTAA

Domains

Predicted by InterproScan.

• N-6 DNA Methylase (N6_Mtase) (68-283)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYH	Streptococcus mutans UA159	61.076	99.685	0.609
comYH	Streptococcus mutans UA140	60.759	99.685	0.606