Detailed information NTG0544893

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: J0W32_RS01330
• Genome accession: NZ_CP071317
• Coordinates: 284429..285622 (-)
• Length: 397 a.a.
• NCBI ID: WP_180057278.1
• Uniprot ID: -
• Organism: Acinetobacter indicus strain GXNN15X4
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 279429..290622

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J0W32_RS01310 (J0W32_01310)	-	280909..281358 (+)	450	WP_016658087.1	MaoC family dehydratase	-
J0W32_RS01315 (J0W32_01315)	-	281462..282490 (+)	1029	WP_005178175.1	helix-turn-helix transcriptional regulator	-
J0W32_RS01320 (J0W32_01320)	gcvH	282559..282933 (+)	375	WP_005178176.1	glycine cleavage system protein GcvH	-
J0W32_RS01325 (J0W32_01325)	-	283189..284370 (+)	1182	WP_180057252.1	MFS transporter	-
J0W32_RS01330 (J0W32_01330)	pilU	284429..285622 (-)	1194	WP_180057278.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
J0W32_RS01335 (J0W32_01335)	-	285876..286931 (-)	1056	WP_016658084.1	3-deoxy-7-phosphoheptulonate synthase	-
J0W32_RS01340 (J0W32_01340)	hppD	287806..288864 (+)	1059	WP_016658083.1	4-hydroxyphenylpyruvate dioxygenase	-
J0W32_RS01345 (J0W32_01345)	-	289016..290398 (+)	1383	WP_005178192.1	amino acid permease	-

Sequence

Protein

• Length: 397 a.a.
• Molecular weight: 44688.10 Da
• Isoelectric Point: 6.2356

>NTDB_id=544893 J0W32_RS01330 WP_180057278.1 284429..285622(-) (pilU) [Acinetobacter indicus strain GXNN15X4]
MYSAELLEDARKFMFHMLSKVVEFGGSDLFITADFPPSIKHQGMMKALGQQALTAEKTKLFAYSLMNEKQRSEFETDLEC
NFAISVPEVSRFRVNVFQQQLHVGMVIRTISAEILNFSQLKLPESLKHIIMEKRGLVLVVGGTGSGKSTSLAAMIDHRNE
NSAGHIITVEDPVEYVHKHKKSMITHREVGVDSHSWHNALKNTLRQAPDVILIGEIRDTETMEHAIAFAETGHLCLGTLH
ANNANQTLDRIINFFPEERRNQLLMDLSSNMKAIISQRLVRTEDGKGRRAAVEIMLNTPLISELILKGQFHELKSIMGKS
RELGMQTFDQALFDLYNEGAISYEEAIRNADSMNELRLQIKLKSNRPSEASAAMSFSMLEEPKPEDEDTESAPQQSA

Nucleotide

• Length: 1194 bp

>NTDB_id=544893 J0W32_RS01330 WP_180057278.1 284429..285622(-) (pilU) [Acinetobacter indicus strain GXNN15X4]
ATGTACAGTGCAGAATTACTCGAAGATGCGCGTAAGTTTATGTTTCATATGCTCAGCAAAGTGGTTGAGTTTGGGGGATC
AGATTTATTTATTACCGCGGATTTTCCACCGAGCATTAAACATCAGGGCATGATGAAAGCGCTGGGACAACAGGCGCTGA
CTGCAGAAAAAACCAAGCTGTTTGCCTACAGCCTCATGAATGAAAAACAGCGTAGCGAGTTTGAAACTGATCTGGAATGC
AACTTTGCCATTAGTGTGCCGGAGGTATCGCGTTTTCGGGTCAATGTGTTTCAACAGCAGCTGCATGTCGGGATGGTGAT
TCGAACCATTAGCGCGGAAATTCTAAACTTTAGCCAGCTGAAACTGCCGGAATCGCTGAAGCATATTATTATGGAAAAGC
GTGGTCTGGTGCTGGTGGTGGGGGGAACCGGTTCAGGTAAATCGACCTCTTTGGCGGCGATGATTGATCATCGTAATGAA
AATTCAGCCGGGCATATTATTACCGTGGAAGACCCGGTGGAATATGTGCACAAGCATAAGAAGTCAATGATTACCCATCG
CGAAGTCGGGGTCGACAGCCATTCCTGGCACAATGCGCTGAAAAATACCTTGCGTCAGGCACCGGATGTAATTTTAATTG
GCGAGATTCGTGATACCGAAACCATGGAACACGCGATTGCCTTTGCCGAAACCGGGCATTTATGTTTGGGCACCTTGCAT
GCCAATAACGCCAACCAGACGCTGGACAGGATTATCAACTTTTTCCCGGAAGAACGCCGTAACCAGCTGCTGATGGATCT
GTCATCCAATATGAAGGCCATTATTTCCCAGCGTCTGGTGCGTACCGAAGATGGTAAAGGGCGCCGTGCGGCAGTCGAGA
TTATGCTGAATACGCCGCTGATTTCTGAACTGATTTTAAAAGGCCAGTTCCATGAGTTAAAGTCGATTATGGGCAAATCG
CGTGAACTGGGCATGCAGACGTTTGATCAGGCTTTATTTGATCTGTATAACGAAGGTGCAATTTCCTATGAAGAAGCAAT
TCGTAATGCCGACTCGATGAATGAATTGCGCTTACAGATCAAGCTGAAAAGTAACCGGCCAAGCGAAGCTTCGGCAGCTA
TGAGCTTTAGCATGCTGGAAGAACCAAAACCGGAAGATGAAGATACGGAATCTGCTCCTCAACAGAGTGCTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (90-282)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	57.297	93.199	0.534
pilU	Acinetobacter baylyi ADP1	54.144	91.184	0.494
pilU	Vibrio cholerae strain A1552	52.367	85.139	0.446
pilT	Acinetobacter nosocomialis M2	44.242	83.123	0.368
pilT	Acinetobacter baumannii D1279779	44.242	83.123	0.368
pilT	Acinetobacter baumannii strain A118	44.242	83.123	0.368
pilT	Acinetobacter baylyi ADP1	43.333	83.123	0.36
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.814	84.131	0.36