Detailed information NTG0541132

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: JW980_RS01545
• Genome accession: NZ_CP070866
• Coordinates: 319952..321010 (+)
• Length: 352 a.a.
• NCBI ID: WP_125273594.1
• Uniprot ID: -
• Organism: Acinetobacter johnsonii strain XY27
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 314952..326010

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JW980_RS01530 (JW980_01530)	mraY	315232..316350 (+)	1119	WP_004691502.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-
JW980_RS01535 (JW980_01535)	-	316420..317226 (+)	807	WP_201701773.1	putative RNA methyltransferase	-
JW980_RS01540 (JW980_01540)	ponA	317258..319786 (-)	2529	WP_201701771.1	penicillin-binding protein PBP1a	-
JW980_RS01545 (JW980_01545)	pilM	319952..321010 (+)	1059	WP_125273594.1	pilus assembly protein PilM	Machinery gene
JW980_RS01550 (JW980_01550)	pilN	321010..321666 (+)	657	WP_005401354.1	PilN domain-containing protein	Machinery gene
JW980_RS01555 (JW980_01555)	pilO	321663..322385 (+)	723	WP_004691497.1	type 4a pilus biogenesis protein PilO	Machinery gene
JW980_RS01560 (JW980_01560)	pilP	322385..322912 (+)	528	WP_094148569.1	pilus assembly protein PilP	Machinery gene
JW980_RS01565 (JW980_01565)	pilQ	322932..325010 (+)	2079	WP_205667517.1	type IV pilus secretin PilQ	Machinery gene
JW980_RS01570 (JW980_01570)	-	325099..325581 (+)	483	WP_207778853.1	shikimate kinase	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 38967.58 Da
• Isoelectric Point: 4.4181

>NTDB_id=541132 JW980_RS01545 WP_125273594.1 319952..321010(+) (pilM) [Acinetobacter johnsonii strain XY27]
MLRLYRKPSKGLIGVDISSTSVKVLELSVKNNRYWVESYALVPLPEGSVVEKNILNPEAVGDALERAVNLANVQSTDVAL
AVPTSMVITKIIEMDADMNDDEREIQIRDDAEQYIPFPLDEASLDFEVLPDRLANPNRVNVLLVATRIENVEARAEALEL
GGLMPKIADVESFAIENAFKVFSDTLPMGVNTVGILDIGHTMTTLSVMQNNKVIYTREQVFGGKQLTQEIQNRYGLSFEE
AGRAKKSRTLPDDYDIEVLEPFLEAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQIDIKKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=541132 JW980_RS01545 WP_125273594.1 319952..321010(+) (pilM) [Acinetobacter johnsonii strain XY27]
GTGCTCAGGTTATATCGTAAGCCAAGTAAGGGGTTAATAGGAGTAGATATTAGTTCGACTTCTGTTAAGGTATTGGAACT
TTCTGTTAAAAACAATCGGTATTGGGTGGAGAGCTATGCACTAGTCCCATTACCAGAAGGAAGTGTGGTCGAAAAAAATA
TATTGAATCCAGAAGCAGTTGGTGATGCCCTTGAGCGTGCGGTAAATTTGGCCAATGTTCAATCGACAGACGTAGCACTG
GCAGTTCCGACGTCCATGGTGATTACTAAAATCATTGAAATGGATGCCGATATGAACGATGACGAACGTGAAATTCAGAT
TCGTGATGATGCTGAGCAATATATTCCATTCCCATTAGATGAAGCGAGTTTGGACTTTGAAGTCCTTCCAGACCGTTTAG
CCAATCCCAATCGTGTCAATGTACTCCTTGTTGCAACCCGCATTGAAAATGTAGAGGCGCGTGCCGAAGCATTGGAGTTG
GGTGGTTTAATGCCTAAGATTGCCGATGTTGAAAGTTTCGCCATTGAAAATGCATTCAAAGTCTTTTCAGATACGCTTCC
AATGGGCGTGAATACTGTTGGGATTCTGGACATTGGTCACACCATGACGACCTTATCTGTCATGCAGAATAATAAAGTCA
TTTATACCCGTGAACAGGTGTTCGGTGGTAAACAACTGACTCAAGAAATTCAAAACCGTTATGGTTTGTCTTTTGAAGAA
GCTGGACGTGCCAAAAAAAGCCGTACCTTGCCTGACGACTATGATATTGAAGTCCTTGAACCTTTTCTTGAAGCTGTGGT
GCAACAAGCAGCACGTTCTTTGCAGTTCTTTTTTTCGTCCTCTCAATTTAATGAGATCGACCATATTTTATTGGCAGGGG
GGAATGCCAATATTCCAGGACTGGCGAAGTTATTGCAACAAAAATTAGGTTATCGGGTCACCATTGCCAACCCATTTTTA
CAAATGGGCTTTTCTCCACAAATCGACATTAAAAAAATTGAAAATGATGCTTCATCACTCATGGTGGCATGTGGATTGGC
ATTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	85.227	100	0.852
comM	Acinetobacter nosocomialis M2	85.227	100	0.852
comM	Acinetobacter baylyi ADP1	80.114	100	0.801
pilM	Legionella pneumophila strain ERS1305867	40.96	100	0.412