Detailed information NTG0540488

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: I6J48_RS10650
• Genome accession: NZ_CP070518
• Coordinates: 2262212..2263270 (+)
• Length: 352 a.a.
• NCBI ID: WP_205468438.1
• Uniprot ID: -
• Organism: Acinetobacter calcoaceticus strain FDAARGOS_1218
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2257212..2268270

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6J48_RS10635 (I6J48_10635)	-	2258275..2258607 (+)	333	WP_003653820.1	hypothetical protein	-
I6J48_RS10640 (I6J48_10640)	-	2258610..2259434 (+)	825	WP_205468436.1	putative RNA methyltransferase	-
I6J48_RS10645 (I6J48_10645)	ponA	2259489..2262050 (-)	2562	WP_205468437.1	penicillin-binding protein PBP1a	-
I6J48_RS10650 (I6J48_10650)	pilM	2262212..2263270 (+)	1059	WP_205468438.1	pilus assembly protein PilM	Machinery gene
I6J48_RS10655 (I6J48_10655)	pilN	2263270..2263911 (+)	642	WP_205468439.1	PilN domain-containing protein	Machinery gene
I6J48_RS10660 (I6J48_10660)	pilO	2263908..2264657 (+)	750	WP_005038271.1	type 4a pilus biogenesis protein PilO	Machinery gene
I6J48_RS10665 (I6J48_10665)	pilP	2264668..2265195 (+)	528	WP_003653811.1	pilus assembly protein PilP	Machinery gene
I6J48_RS10670 (I6J48_10670)	pilQ	2265258..2267411 (+)	2154	WP_205468440.1	type IV pilus secretin PilQ family protein	Machinery gene
I6J48_RS10675 (I6J48_10675)	aroK	2267423..2267992 (+)	570	WP_003653807.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39051.63 Da
• Isoelectric Point: 4.4217

>NTDB_id=540488 I6J48_RS10650 WP_205468438.1 2262212..2263270(+) (pilM) [Acinetobacter calcoaceticus strain FDAARGOS_1218]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTSNAAI
AVPTSTVIHKTIEMDADMNDDEREVQIRLDAEQYIPFPLDEVSLDFEVLPDRLPNSNRVNVLLVATRTENVETRVEVLEL
VDLTPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
AGRAKKERSLPDDYDIEVLEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=540488 I6J48_RS10650 WP_205468438.1 2262212..2263270(+) (pilM) [Acinetobacter calcoaceticus strain FDAARGOS_1218]
GTGCTCAGGTTATATCGTAAACCGAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTTAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAGAACAGTGTAGTTGAAAAAAATA
TCTTGAATCCAGAGGCAGTTGCAGAAGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCAGTAACGCTGCAATT
GCTGTTCCAACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAATGATGATGAACGAGAAGTTCAGAT
TCGATTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAAGTGAGCCTTGATTTTGAGGTTTTACCAGATCGACTGC
CTAATTCAAACCGTGTGAATGTACTTTTAGTTGCAACAAGAACAGAAAATGTTGAAACACGAGTAGAAGTACTGGAACTG
GTGGACTTAACTCCTAAGCTTGCTGATGTCGAAAGTTATGCTGTCGAGCGTGCTTTTAGTGTATTTGCTGATAGCTTGCC
AATGGGTGCAAATACCATTGGGATTTTAGATATCGGTCATACCATGACGACATTATCGGTTATGCAAAATGGCAAAATCA
TTTATACCCGTGAACAAGTCTTTGGTGGTAAACAGCTTACTTTGGAAATTCAAAGCCGTTATGGTTTGTCTTTAGAAGAA
GCGGGACGGGCTAAAAAAGAGCGCTCTTTACCAGATGATTATGATATTGAAGTCTTAGAGCCATTTCTTGATGCTGTCGT
GCAGCAAGCAGCTAGATCTCTACAATTTTTCTTCTCTTCATCACAATTCAATGAAATTGACCATATTTTACTAGCAGGTG
GGAATGCCAATATTCCTGGGCTTGCCAAATTGTTGCAGCAAAAGCTTGGTTACCGTGTGACCATTGCCAATCCGTTTTTA
CAAATGGGTTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCTTCGTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	96.591	100	0.966
comM	Acinetobacter nosocomialis M2	96.591	100	0.966
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.373	100	0.426