Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   I6K87_RS09485 Genome accession   NZ_CP069892
Coordinates   1906699..1908678 (+) Length   659 a.a.
NCBI ID   WP_204982604.1    Uniprot ID   -
Organism   Streptococcus anginosus strain FDAARGOS_1357     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1901699..1913678
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6K87_RS09470 (I6K87_09470) - 1901904..1903514 (+) 1611 WP_204982601.1 CTP synthase -
  I6K87_RS09475 (I6K87_09475) - 1903677..1904366 (+) 690 WP_204982602.1 B3/4 domain-containing protein -
  I6K87_RS09480 (I6K87_09480) amiA3 1904525..1906501 (+) 1977 WP_204982603.1 peptide ABC transporter substrate-binding protein Regulator
  I6K87_RS09485 (I6K87_09485) amiA3 1906699..1908678 (+) 1980 WP_204982604.1 peptide ABC transporter substrate-binding protein Regulator
  I6K87_RS09490 (I6K87_09490) amiC 1909053..1910549 (+) 1497 WP_204982605.1 ABC transporter permease Regulator
  I6K87_RS09495 (I6K87_09495) amiD 1910549..1911475 (+) 927 WP_003026180.1 oligopeptide ABC transporter permease OppC Regulator
  I6K87_RS09500 (I6K87_09500) amiE 1911484..1912551 (+) 1068 WP_003039437.1 ABC transporter ATP-binding protein Regulator
  I6K87_RS09505 (I6K87_09505) amiF 1912562..1913485 (+) 924 WP_003026175.1 ATP-binding cassette domain-containing protein Regulator

Sequence

Protein


Download         Length: 659 a.a.        Molecular weight: 73222.85 Da        Isoelectric Point: 7.3314

>NTDB_id=537285 I6K87_RS09485 WP_204982604.1 1906699..1908678(+) (amiA3) [Streptococcus anginosus strain FDAARGOS_1357]
MKKSKIITLAALALLATGTLAACSSSKTSSGNKTFSYVYEQDPDNLNYLTTGKAATANLTSNVIDGLLENDRYGNLVPSV
AKDWTVSKDGLTYTYTLRKGVKWYTSEGEEYAEVKAQDFVTGLKYAADNKSDAIYLVQDSVKGLDAYMKGENKDFSSVGI
KAVDDYTVQYTLNRPESFWNSKTTMGVLAPVNAEFLKSKGNKFAQATDPSSLLYNGPYLLKSITAKSSVEFAKNPNYWDK
KNVHIDNIKLSYYDGQDQDKLAKGFSDGSFTNAKVFPTSPSYASVSKKYKDNIVYTPQDATTYLVATNIDRQSYKHTSKT
TDAQKTSTKKALLNKDFRQAITFAFDRTAYASQVNGKDGATKMLRNLFVPPTFVQTDDKSFGELVKEKLVGYDESWKDVN
LNDAQDGLYNPTKAKEKLAKAKAALQADGVQFPIHIDMPVDQTATNKVQRVQSLKQSIEKNLGKENVVIDIQQMSKDDVN
NITYFAESAAAEDWDLSDNVGWSPDFQDPSTYLDVIKPSSGESTKTYLGFDAGTNNAAAAQVGMNEYEKLLNEAEKETTN
TNARYEKYAAAQAWLTDNALVIPTTTLTGRPILSRTVPFTNPFAWSGNKGNSEIILYKYLELQDEPVTQDQYKKAMTKWN
KERSKSNKKAQEELADHVK

Nucleotide


Download         Length: 1980 bp        

>NTDB_id=537285 I6K87_RS09485 WP_204982604.1 1906699..1908678(+) (amiA3) [Streptococcus anginosus strain FDAARGOS_1357]
ATGAAAAAAAGTAAAATTATTACCCTTGCAGCGCTAGCCTTGCTTGCAACAGGAACTTTAGCAGCTTGTTCTAGCTCTAA
AACAAGCTCTGGGAATAAAACATTCTCATATGTTTATGAGCAGGATCCAGATAATTTGAACTATTTGACAACTGGGAAAG
CAGCTACTGCAAATCTTACCAGCAATGTTATTGACGGACTTTTGGAAAATGACCGTTATGGAAATCTAGTTCCTTCTGTG
GCGAAGGATTGGACCGTCTCTAAAGATGGCCTGACTTATACTTATACACTTCGTAAGGGTGTGAAATGGTACACATCAGA
GGGCGAAGAGTATGCAGAAGTTAAGGCACAAGACTTTGTAACGGGCTTAAAATATGCTGCAGACAATAAATCTGATGCTA
TTTACTTGGTGCAAGATTCTGTTAAAGGCTTGGATGCTTACATGAAAGGTGAAAATAAAGATTTCTCTTCTGTCGGTATC
AAAGCAGTCGATGATTACACGGTTCAATACACTCTTAATCGACCAGAAAGTTTTTGGAACTCAAAAACAACAATGGGCGT
TCTAGCACCAGTTAATGCAGAATTTTTGAAATCAAAAGGCAATAAATTTGCACAAGCAACAGATCCATCTAGTCTTCTTT
ATAATGGACCATACTTGCTAAAATCTATCACAGCAAAATCATCTGTCGAATTTGCGAAAAATCCAAACTATTGGGATAAG
AAAAATGTGCACATTGATAACATCAAGTTGTCTTACTATGATGGTCAAGACCAGGACAAACTTGCTAAAGGATTTAGCGA
TGGTTCATTTACTAATGCCAAAGTATTTCCAACAAGTCCAAGTTATGCTTCTGTCAGCAAGAAATACAAAGATAACATCG
TTTATACTCCGCAAGATGCAACGACTTACCTAGTAGCTACAAACATTGACCGTCAATCTTACAAACATACTTCAAAGACA
ACAGATGCTCAAAAGACTTCTACTAAGAAAGCTTTGCTAAATAAAGACTTCCGTCAAGCCATTACATTTGCATTTGACCG
CACAGCTTATGCATCACAAGTAAATGGTAAAGATGGTGCAACGAAGATGCTTCGTAACCTCTTTGTACCACCAACGTTTG
TTCAAACAGATGACAAGAGCTTTGGAGAATTAGTCAAAGAAAAATTAGTCGGCTACGATGAAAGTTGGAAAGATGTCAAC
TTAAATGATGCGCAAGACGGACTTTACAATCCAACCAAAGCCAAGGAAAAATTAGCCAAAGCTAAAGCGGCGCTTCAAGC
AGACGGCGTTCAATTCCCAATCCACATTGATATGCCAGTTGACCAAACAGCGACTAATAAAGTTCAACGCGTACAATCAT
TGAAGCAATCAATTGAAAAGAATCTTGGTAAAGAAAATGTTGTGATTGATATTCAACAAATGTCTAAAGACGACGTGAAT
AATATCACTTACTTTGCCGAATCTGCAGCGGCAGAAGATTGGGATCTTTCTGATAATGTTGGTTGGAGTCCAGACTTCCA
AGACCCATCTACCTATCTTGATGTTATCAAACCTTCAAGCGGTGAAAGCACTAAGACTTATCTAGGATTTGATGCAGGCA
CGAATAACGCTGCTGCAGCACAAGTTGGTATGAACGAATATGAAAAATTACTGAATGAGGCTGAAAAAGAAACCACTAAT
ACGAATGCACGTTATGAAAAATATGCTGCAGCACAAGCTTGGTTGACAGATAATGCTTTGGTTATTCCGACAACAACCTT
GACTGGTCGTCCAATTCTTTCTCGCACAGTGCCATTTACTAATCCATTTGCTTGGTCAGGAAACAAAGGGAATAGTGAAA
TCATTCTATATAAATATCTTGAACTCCAAGATGAGCCTGTTACACAAGATCAGTACAAGAAAGCTATGACTAAATGGAAT
AAAGAGCGATCAAAATCTAATAAAAAAGCTCAAGAAGAACTTGCAGATCATGTTAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(76-520)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

61.212

100

0.613
  amiA3 Streptococcus thermophilus LMG 18311

60.606

100

0.607
  amiA Streptococcus salivarius strain HSISS4

60.455

100

0.605