Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiC   Type   Regulator
Locus tag   I6K87_RS09490 Genome accession   NZ_CP069892
Coordinates   1909053..1910549 (+) Length   498 a.a.
NCBI ID   WP_204982605.1    Uniprot ID   -
Organism   Streptococcus anginosus strain FDAARGOS_1357     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1904053..1915549
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6K87_RS09480 (I6K87_09480) amiA3 1904525..1906501 (+) 1977 WP_204982603.1 peptide ABC transporter substrate-binding protein Regulator
  I6K87_RS09485 (I6K87_09485) amiA3 1906699..1908678 (+) 1980 WP_204982604.1 peptide ABC transporter substrate-binding protein Regulator
  I6K87_RS09490 (I6K87_09490) amiC 1909053..1910549 (+) 1497 WP_204982605.1 ABC transporter permease Regulator
  I6K87_RS09495 (I6K87_09495) amiD 1910549..1911475 (+) 927 WP_003026180.1 oligopeptide ABC transporter permease OppC Regulator
  I6K87_RS09500 (I6K87_09500) amiE 1911484..1912551 (+) 1068 WP_003039437.1 ABC transporter ATP-binding protein Regulator
  I6K87_RS09505 (I6K87_09505) amiF 1912562..1913485 (+) 924 WP_003026175.1 ATP-binding cassette domain-containing protein Regulator
  I6K87_RS09510 (I6K87_09510) - 1913628..1914464 (+) 837 WP_003039829.1 Cof-type HAD-IIB family hydrolase -
  I6K87_RS09515 (I6K87_09515) - 1914524..1915489 (-) 966 WP_003039503.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 498 a.a.        Molecular weight: 55946.09 Da        Isoelectric Point: 10.0447

>NTDB_id=537286 I6K87_RS09490 WP_204982605.1 1909053..1910549(+) (amiC) [Streptococcus anginosus strain FDAARGOS_1357]
MKKYIFMRILRSLVSIFMVTTLTYTIIYTMVPRKLIFKQDPNYNKIATTPDKKANYENTIFERMGYIDYYDTKELQEKAS
KENSSVTVEPTNENKKIYEAYIKKLGRGWKLQQFKESKQFYATREVPVYERVLGFYGNLIQIDHTGAVKDASNPNLKRYI
RIENDPAIGWSVVGSGTKHKYLLYFNSRFPFIHQNFVRLNLGISYPTYANLPVLQVISQGQGQTQTSEVQFPTGKKTSSV
NIYTRTYKSPKQADARDVANYGKDDPYTATESNYQYPSMIVSSSIVGLIGLALSYLIAVPLGSYMARFKNTLFDSISTGA
LTFLMSLPTIALVYIIRLIGSAIGLPDSFPILGAGDWRSYVLPAVILGLLSAPWTAVWIRRYMIDLQSQDFVRFARAKGL
SEKEISNKHIFKNAMVPLVSSIPNSVIGVITGATLTETVFAFPGMGKMLIDSVKASNNSMVVGLVFIFTCLSIFALLLGD
ILMTVLDPRIKLTSKGGK

Nucleotide


Download         Length: 1497 bp        

>NTDB_id=537286 I6K87_RS09490 WP_204982605.1 1909053..1910549(+) (amiC) [Streptococcus anginosus strain FDAARGOS_1357]
ATGAAGAAATATATTTTTATGCGTATCTTACGCTCTTTAGTATCTATTTTCATGGTAACAACGCTGACTTACACCATTAT
CTATACTATGGTGCCTAGGAAGTTGATTTTCAAACAGGACCCGAACTATAACAAAATAGCGACAACTCCTGATAAAAAAG
CCAATTACGAAAATACGATTTTTGAGCGTATGGGTTACATTGACTACTATGATACGAAGGAATTGCAAGAAAAAGCTAGT
AAAGAGAATTCCTCTGTAACAGTAGAACCTACTAATGAAAATAAAAAAATCTATGAAGCTTACATCAAAAAGCTGGGACG
CGGTTGGAAATTGCAGCAATTTAAAGAAAGCAAGCAATTTTATGCAACTCGTGAAGTTCCAGTCTATGAACGCGTTCTTG
GTTTCTATGGTAATTTGATTCAAATTGACCATACAGGTGCTGTGAAAGATGCTTCTAATCCGAATTTGAAGCGTTATATT
CGCATTGAAAATGATCCTGCTATTGGTTGGTCTGTTGTTGGTTCTGGAACGAAACATAAATATTTATTGTACTTCAATAG
TCGGTTTCCATTTATCCACCAAAATTTTGTGAGATTAAATCTGGGAATCTCCTATCCAACCTATGCAAATCTCCCTGTCC
TACAAGTTATTTCACAAGGGCAAGGTCAAACGCAGACTTCAGAAGTTCAATTTCCAACAGGAAAGAAAACATCATCTGTT
AATATTTATACACGTACATATAAGTCTCCAAAACAAGCCGATGCACGCGATGTTGCTAATTACGGAAAAGATGATCCTTA
TACGGCGACAGAGAGCAATTATCAATATCCATCTATGATTGTGAGCTCTTCTATTGTTGGGTTGATTGGTTTGGCCTTGT
CATACTTAATCGCCGTTCCACTTGGATCTTATATGGCTCGTTTTAAGAATACATTGTTTGATAGTATTTCAACCGGTGCT
TTGACTTTCTTAATGTCACTGCCGACTATTGCCTTGGTTTATATCATTCGGTTGATTGGCTCAGCAATTGGCTTGCCTGA
TTCATTCCCTATTTTGGGAGCAGGTGATTGGCGCTCTTATGTGCTGCCGGCAGTTATTCTTGGGCTCTTGAGTGCACCTT
GGACAGCAGTGTGGATTCGTCGTTATATGATTGACTTGCAATCACAAGATTTTGTTCGTTTTGCACGTGCAAAAGGTCTT
TCTGAAAAAGAAATTTCAAATAAACATATTTTCAAAAATGCCATGGTGCCACTTGTATCCAGCATTCCAAACTCAGTTAT
TGGGGTTATTACAGGTGCAACTTTGACTGAAACAGTCTTCGCTTTCCCTGGTATGGGTAAGATGTTGATTGACTCTGTTA
AAGCTTCAAATAACTCTATGGTCGTTGGTCTTGTCTTTATCTTTACATGTCTTTCTATCTTCGCTCTTCTATTGGGTGAT
ATTCTGATGACAGTACTTGACCCACGTATTAAATTAACATCAAAAGGAGGTAAATAA

Domains

Predicted by InterproScan.

Binding-protein-dependent transport system inner membrane component (BPD_transp_1)

(298-491)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiC Streptococcus salivarius strain HSISS4

80.522

100

0.805
  amiC Streptococcus thermophilus LMG 18311

79.719

100

0.797
  amiC Streptococcus thermophilus LMD-9

79.518

100

0.795