Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   I6K87_RS09480 Genome accession   NZ_CP069892
Coordinates   1904525..1906501 (+) Length   658 a.a.
NCBI ID   WP_204982603.1    Uniprot ID   -
Organism   Streptococcus anginosus strain FDAARGOS_1357     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1899525..1911501
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6K87_RS09460 (I6K87_09460) tig 1899611..1900894 (+) 1284 WP_151380013.1 trigger factor -
  I6K87_RS09465 (I6K87_09465) rpoE 1901134..1901721 (+) 588 WP_020999802.1 DNA-directed RNA polymerase subunit delta -
  I6K87_RS09470 (I6K87_09470) - 1901904..1903514 (+) 1611 WP_204982601.1 CTP synthase -
  I6K87_RS09475 (I6K87_09475) - 1903677..1904366 (+) 690 WP_204982602.1 B3/4 domain-containing protein -
  I6K87_RS09480 (I6K87_09480) amiA3 1904525..1906501 (+) 1977 WP_204982603.1 peptide ABC transporter substrate-binding protein Regulator
  I6K87_RS09485 (I6K87_09485) amiA3 1906699..1908678 (+) 1980 WP_204982604.1 peptide ABC transporter substrate-binding protein Regulator
  I6K87_RS09490 (I6K87_09490) amiC 1909053..1910549 (+) 1497 WP_204982605.1 ABC transporter permease Regulator
  I6K87_RS09495 (I6K87_09495) amiD 1910549..1911475 (+) 927 WP_003026180.1 oligopeptide ABC transporter permease OppC Regulator

Sequence

Protein


Download         Length: 658 a.a.        Molecular weight: 72526.16 Da        Isoelectric Point: 7.3891

>NTDB_id=537284 I6K87_RS09480 WP_204982603.1 1904525..1906501(+) (amiA3) [Streptococcus anginosus strain FDAARGOS_1357]
MKKSKIIAVAGVALLTAGFLTACSGSKSNSAETKFGYVYSSDPETLDYVTSGKATTSDLVTNGVDGLLENDKYGNLVPSM
AKSWTVSKDGLTYTYKLRKGAKWYTSEGEEYAEVKAQDFVTGLKHAADKKSEALYLVQNSIKGLDAYVNGQTKDFSTVGV
KAVDDYTVQYTLNKPEPYWNSKTTSAIMWPINAEFLKSKGNKFGQSTDPNSILYNGPFLMKAITAKSAVEYVKNKHYWDK
DKVNVDSIKLAYYDGQDQDSLARNFKDGAYTYARLFPASSNFSTFEKDFKDNIYTSEAGAGTAVLGLNIDRQTYNHTAKK
TDEEKNSTKKALLNKDFRQALNFALDRDSYAAQVNGKEGAAKAIRNMFVPSDFVQVGEKSFSDVVEEKLASYGDDWKGVK
LADSQNGLYNPDKAKAKFAKAKEALQAQGVQFPIHIDVPVIETSKNFVARMQSMKQSIEKVLGKENVVMDLNMMSEDDVM
NITYYAPNAASEDWDLSGIVGWTPDYQDPSTYLDILKSTSSDNTKTWFGFDSGSENAGAKAVGLDEYNKLVDEAGAETTD
IAKRYEKYAAAQAWLTDSSLVLPTMASTGAGTFVSRIQPFSGAFAQTGSKGSSTYFKYIKVGNDTVTKKDYEAAKKKWQK
EKAESNKKAQDKLADHVK

Nucleotide


Download         Length: 1977 bp        

>NTDB_id=537284 I6K87_RS09480 WP_204982603.1 1904525..1906501(+) (amiA3) [Streptococcus anginosus strain FDAARGOS_1357]
ATGAAAAAAAGTAAAATTATTGCAGTAGCAGGGGTAGCCCTACTAACTGCTGGTTTTTTAACAGCTTGCTCGGGTTCGAA
ATCAAACTCAGCTGAAACAAAATTTGGTTATGTGTATTCTAGTGATCCAGAAACTTTGGATTATGTAACATCAGGAAAAG
CAACCACTAGCGATCTTGTGACAAATGGAGTTGACGGATTGTTAGAAAATGACAAATATGGAAATCTTGTACCATCAATG
GCTAAGTCATGGACTGTATCAAAAGATGGTTTAACCTATACTTATAAACTTCGTAAGGGTGCCAAATGGTACACATCAGA
AGGGGAAGAATACGCAGAAGTTAAAGCGCAAGACTTTGTAACTGGTTTGAAACATGCTGCCGATAAAAAATCTGAGGCGC
TTTATTTGGTTCAAAACTCAATTAAAGGTTTAGATGCTTACGTGAATGGTCAAACAAAAGACTTTTCAACGGTAGGTGTG
AAAGCAGTTGATGATTATACTGTTCAGTATACATTGAACAAGCCAGAACCATATTGGAATTCTAAGACAACCTCTGCTAT
TATGTGGCCAATCAATGCCGAATTTTTGAAATCTAAAGGAAATAAATTTGGCCAATCAACAGACCCTAACTCAATCCTTT
ATAATGGACCATTCTTGATGAAAGCTATCACAGCAAAATCTGCGGTAGAATATGTTAAAAACAAACATTATTGGGATAAA
GATAAAGTAAATGTTGATAGCATCAAGTTGGCTTATTATGATGGTCAAGACCAAGATTCATTAGCACGTAACTTTAAAGA
TGGTGCTTATACGTATGCACGTCTCTTCCCAGCAAGTTCAAACTTTTCAACTTTTGAAAAGGACTTCAAAGACAATATCT
ATACATCAGAAGCTGGTGCAGGAACAGCAGTTTTAGGACTTAATATTGACCGTCAAACGTACAACCACACTGCTAAAAAA
ACAGATGAAGAAAAAAATTCAACGAAAAAAGCATTGTTGAATAAAGACTTCCGTCAAGCGCTGAACTTTGCGCTTGACCG
CGACTCTTACGCTGCACAAGTCAATGGTAAAGAAGGTGCTGCTAAAGCAATCCGCAATATGTTTGTACCGTCTGACTTTG
TCCAAGTTGGAGAAAAATCATTTAGCGATGTTGTAGAAGAAAAATTAGCTAGCTATGGTGATGACTGGAAGGGTGTCAAA
TTAGCAGATTCACAAAACGGTTTGTACAATCCAGACAAAGCAAAAGCGAAATTTGCAAAAGCAAAAGAAGCATTGCAAGC
TCAAGGTGTGCAATTCCCAATCCACATAGATGTTCCTGTAATTGAAACTTCTAAAAACTTTGTTGCTCGTATGCAATCTA
TGAAACAATCTATTGAAAAAGTGCTTGGCAAAGAAAATGTTGTCATGGACTTGAATATGATGTCAGAAGATGATGTAATG
AACATCACTTATTATGCTCCGAATGCAGCTAGCGAAGATTGGGATCTCTCAGGTATCGTTGGTTGGACTCCTGACTATCA
AGACCCATCTACTTATCTTGACATTTTGAAATCAACATCTTCTGATAATACGAAAACTTGGTTTGGATTTGACTCTGGTA
GTGAAAATGCTGGTGCTAAAGCAGTTGGCTTGGACGAATATAATAAATTAGTCGATGAAGCAGGTGCAGAAACAACAGAC
ATTGCAAAACGTTATGAAAAATATGCAGCAGCACAAGCTTGGTTAACAGACAGTTCACTTGTCTTACCAACAATGGCTTC
AACAGGTGCCGGAACTTTTGTGTCACGCATTCAACCGTTCTCAGGTGCATTTGCGCAAACAGGTAGTAAAGGTAGCTCAA
CCTACTTCAAATACATTAAAGTCGGTAACGATACTGTCACTAAGAAAGACTATGAAGCAGCTAAGAAGAAATGGCAAAAA
GAAAAAGCTGAGTCTAATAAAAAAGCTCAAGATAAATTAGCTGATCATGTAAAATGA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(76-522)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

63.885

100

0.64
  amiA3 Streptococcus thermophilus LMG 18311

63.581

100

0.637
  amiA Streptococcus salivarius strain HSISS4

63.07

100

0.631