Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   I6K87_RS09500 Genome accession   NZ_CP069892
Coordinates   1911484..1912551 (+) Length   355 a.a.
NCBI ID   WP_003039437.1    Uniprot ID   A0AAD2T9A1
Organism   Streptococcus anginosus strain FDAARGOS_1357     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1906484..1917551
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6K87_RS09485 (I6K87_09485) amiA3 1906699..1908678 (+) 1980 WP_204982604.1 peptide ABC transporter substrate-binding protein Regulator
  I6K87_RS09490 (I6K87_09490) amiC 1909053..1910549 (+) 1497 WP_204982605.1 ABC transporter permease Regulator
  I6K87_RS09495 (I6K87_09495) amiD 1910549..1911475 (+) 927 WP_003026180.1 oligopeptide ABC transporter permease OppC Regulator
  I6K87_RS09500 (I6K87_09500) amiE 1911484..1912551 (+) 1068 WP_003039437.1 ABC transporter ATP-binding protein Regulator
  I6K87_RS09505 (I6K87_09505) amiF 1912562..1913485 (+) 924 WP_003026175.1 ATP-binding cassette domain-containing protein Regulator
  I6K87_RS09510 (I6K87_09510) - 1913628..1914464 (+) 837 WP_003039829.1 Cof-type HAD-IIB family hydrolase -
  I6K87_RS09515 (I6K87_09515) - 1914524..1915489 (-) 966 WP_003039503.1 LacI family DNA-binding transcriptional regulator -
  I6K87_RS09520 (I6K87_09520) - 1915470..1916927 (-) 1458 WP_003039426.1 sucrose-6-phosphate hydrolase -

Sequence


Protein


Download         Length: 355 a.a.        Molecular weight: 39751.46 Da        Isoelectric Point: 4.7502

>NTDB_id=537288 I6K87_RS09500 WP_003039437.1 1911484..1912551(+) (amiE) [Streptococcus anginosus strain FDAARGOS_1357]
MTQEKNVILTARDIVVEFDVRDKVLTAIRGVSLDLIEGEVLALVGESGSGKSVLTKTFTGMLEENGRVAQGTIDYRGQDL
TKLKSNKDWEPIRGVKIATIFQDPMTSLDPINTIGSQITEVIIKHQKKTPKEAKEMAVDYMNKVGIPDAEKRFYEYPFQY
SGGMRQRIVIAIALACRPDILICDEPTTALDVTIQAQIIDLLKSLQHEYEFTTIFITHDLGVVASIADKVAVMYAGEIVE
YGTVEEVFYDPRHPYTWSLLSSLPQLADDKGELYSIPGTPPSLYSHLQGDAFALRSDYAMEIDFEEKPPQIYVTDTHWAK
TWLLHENAPKVNKPAVIDDLHEKISSKMGFAHLDA

Nucleotide


Download         Length: 1068 bp        

>NTDB_id=537288 I6K87_RS09500 WP_003039437.1 1911484..1912551(+) (amiE) [Streptococcus anginosus strain FDAARGOS_1357]
ATGACACAAGAAAAAAATGTAATATTGACTGCTCGCGATATTGTCGTGGAATTTGACGTTCGTGATAAGGTCTTAACAGC
TATTCGTGGTGTTTCGCTTGACCTCATTGAAGGTGAAGTTCTTGCACTTGTAGGGGAATCTGGTTCTGGTAAGTCTGTTT
TAACAAAGACATTTACAGGAATGTTAGAAGAAAATGGTCGAGTTGCTCAAGGAACGATTGATTATCGGGGGCAAGATTTG
ACAAAATTGAAGTCAAATAAAGATTGGGAACCTATACGTGGTGTTAAAATTGCGACAATCTTCCAAGATCCGATGACAAG
TTTGGATCCTATTAACACAATCGGTAGCCAAATTACAGAAGTGATTATCAAGCATCAAAAGAAAACGCCTAAAGAAGCGA
AAGAAATGGCTGTTGACTATATGAATAAGGTCGGCATTCCTGATGCTGAAAAGCGCTTTTATGAATACCCATTTCAATAT
TCAGGAGGAATGCGTCAACGGATTGTTATCGCTATTGCGCTTGCTTGTCGACCTGATATCCTTATCTGTGATGAACCAAC
GACAGCGCTTGACGTTACGATTCAAGCACAAATCATTGATTTGTTGAAATCTTTGCAACACGAATATGAATTCACAACTA
TTTTTATCACCCACGACCTGGGAGTGGTAGCAAGTATTGCCGATAAGGTTGCGGTTATGTATGCTGGTGAAATCGTTGAA
TACGGAACAGTAGAAGAAGTTTTTTACGACCCACGCCACCCCTATACTTGGAGTTTGTTATCTAGTCTACCTCAGTTGGC
AGATGACAAGGGTGAGTTGTATTCAATTCCTGGAACGCCGCCATCTCTTTATTCACATTTGCAAGGAGATGCATTTGCCT
TGCGTTCGGATTATGCTATGGAAATTGACTTTGAAGAGAAGCCACCTCAAATCTATGTAACGGATACCCATTGGGCAAAA
ACATGGTTGTTACATGAGAATGCTCCAAAAGTGAATAAGCCAGCTGTTATTGATGATTTACACGAAAAAATTAGCTCAAA
AATGGGCTTTGCCCATTTAGACGCCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

85.836

99.437

0.854

  amiE Streptococcus thermophilus LMG 18311

84.419

99.437

0.839

  amiE Streptococcus thermophilus LMD-9

84.419

99.437

0.839

  oppD Streptococcus mutans UA159

55.932

99.718

0.558