Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   LIO31_RS07715 Genome accession   NZ_CP085086
Coordinates   1536902..1537120 (-) Length   72 a.a.
NCBI ID   WP_074389676.1    Uniprot ID   -
Organism   Streptococcus suis strain Ssuis_MA6     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1531902..1542120
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LIO31_RS07700 hpf 1535291..1535833 (-) 543 WP_004194117.1 ribosome hibernation-promoting factor, HPF/YfiA family -
  LIO31_RS07705 comFA/cflA 1535988..1536161 (-) 174 WP_226960408.1 hypothetical protein Machinery gene
  LIO31_RS07710 - 1536218..1536850 (+) 633 WP_014636235.1 YigZ family protein -
  LIO31_RS07715 prx 1536902..1537120 (-) 219 WP_074389676.1 Paratox Regulator
  LIO31_RS07720 - 1537328..1538065 (-) 738 WP_074389675.1 PlySs2 family phage lysin -
  LIO31_RS07725 - 1538049..1538399 (-) 351 WP_074389674.1 phage holin -
  LIO31_RS07730 - 1538410..1538745 (-) 336 WP_023371100.1 hypothetical protein -
  LIO31_RS07735 - 1538749..1539087 (-) 339 WP_023371101.1 hypothetical protein -
  LIO31_RS07740 - 1539196..1539468 (-) 273 WP_226960409.1 hypothetical protein -
  LIO31_RS07745 - 1539493..1539852 (-) 360 WP_074389673.1 hypothetical protein -
  LIO31_RS07750 - 1539879..1540253 (-) 375 WP_074389672.1 DUF6096 family protein -
  LIO31_RS07755 - 1540264..1540686 (-) 423 WP_074389671.1 phage tail tube protein -
  LIO31_RS07760 - 1540690..1541058 (-) 369 WP_002936856.1 hypothetical protein -
  LIO31_RS07765 - 1541055..1541567 (-) 513 WP_074389670.1 HK97-gp10 family putative phage morphogenesis protein -

Sequence

Protein


Download         Length: 72 a.a.        Molecular weight: 8186.24 Da        Isoelectric Point: 4.3895

>NTDB_id=537236 LIO31_RS07715 WP_074389676.1 1536902..1537120(-) (prx) [Streptococcus suis strain Ssuis_MA6]
MLEYEELKQAVDDGYVTGDTVNIVRRDGKVFDYVLPGEQVRSWEAVSEEKVEDVLKELKKTLSRGRGIVGEL

Nucleotide


Download         Length: 219 bp        

>NTDB_id=537236 LIO31_RS07715 WP_074389676.1 1536902..1537120(-) (prx) [Streptococcus suis strain Ssuis_MA6]
ATGTTAGAATACGAAGAATTAAAGCAAGCAGTAGATGATGGATATGTCACAGGCGATACGGTAAATATCGTACGTCGTGA
CGGTAAGGTATTTGACTATGTTTTACCAGGCGAGCAAGTCAGGTCGTGGGAAGCGGTGAGCGAGGAGAAGGTGGAAGATG
TGTTGAAGGAATTAAAAAAGACCTTGTCCAGAGGTCGGGGAATAGTCGGGGAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

63.333

83.333

0.528
  prx Streptococcus pyogenes MGAS8232

61.667

83.333

0.514
  prx Streptococcus pyogenes MGAS315

61.667

83.333

0.514
  prx Streptococcus pyogenes MGAS315

58.333

83.333

0.486
  prx Streptococcus pyogenes MGAS315

66.667

58.333

0.389
  prx Streptococcus pyogenes MGAS315

64.286

58.333

0.375
  prx Streptococcus pyogenes MGAS315

61.905

58.333

0.361