Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   I6J38_RS08995 Genome accession   NZ_CP069558
Coordinates   1790805..1792073 (+) Length   422 a.a.
NCBI ID   WP_006269156.1    Uniprot ID   F9PAA4
Organism   Streptococcus constellatus strain FDAARGOS_1208     
Function   facilitate localization of RecA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1785805..1797073
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J38_RS08970 (I6J38_08970) - 1785836..1786249 (-) 414 WP_006269778.1 EamA family transporter -
  I6J38_RS08975 (I6J38_08975) - 1786410..1787264 (-) 855 WP_006269187.1 Rgg/GadR/MutR family transcriptional regulator -
  I6J38_RS08980 (I6J38_08980) - 1787647..1787916 (+) 270 WP_020998096.1 hypothetical protein -
  I6J38_RS08985 (I6J38_08985) - 1788014..1790023 (+) 2010 WP_020998095.1 hypothetical protein -
  I6J38_RS08990 (I6J38_08990) - 1790020..1790649 (+) 630 WP_020998094.1 ABC transporter ATP-binding protein -
  I6J38_RS08995 (I6J38_08995) cinA 1790805..1792073 (+) 1269 WP_006269156.1 competence/damage-inducible protein A Machinery gene
  I6J38_RS09000 (I6J38_09000) recA 1792122..1793267 (+) 1146 WP_020998092.1 recombinase RecA Machinery gene
  I6J38_RS09005 (I6J38_09005) spx 1793354..1793752 (+) 399 WP_003026638.1 transcriptional regulator Spx -
  I6J38_RS09010 (I6J38_09010) - 1793889..1794389 (+) 501 WP_006269036.1 SP0191 family lipoprotein -
  I6J38_RS10225 - 1794715..1795050 (+) 336 WP_006268977.1 SP0191 family lipoprotein -
  I6J38_RS09020 (I6J38_09020) - 1795174..1795440 (+) 267 WP_009569646.1 IreB family regulatory phosphoprotein -
  I6J38_RS09025 (I6J38_09025) ruvX 1795440..1795859 (+) 420 WP_003071469.1 Holliday junction resolvase RuvX -
  I6J38_RS09030 (I6J38_09030) - 1795877..1796182 (+) 306 WP_006269082.1 DUF1292 domain-containing protein -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46095.86 Da        Isoelectric Point: 5.6090

>NTDB_id=535554 I6J38_RS08995 WP_006269156.1 1790805..1792073(+) (cinA) [Streptococcus constellatus strain FDAARGOS_1208]
MKAEIIAVGTEILTGQIVNTNAQFLSEKLASLGIDVYFQTAVGDNENRLLSILEIAKKRSDLVILCGGLGPTEDDLTKQV
LAKFLNRRLVFDQVAMEKLDRFFASRLDYVRTPNNERQAQIVEDSISLQNETGLAVGGVIEVSGVTYVVLPGPPSELKPM
VNNELIPILATDQKLYSRVLRFFGIGESQLVTLLGDLIDAQIDPTIAPYAKTGEVTLRLSTKASSQKEADTKFAYLEKKI
LAVQTFEKQRLVDLFYAYGDDNSLAQTTFELLRRAGKTVTAAESLTAGLFQATLANFSGASNVFSGGFVTYSMEEKSRML
DIPLADLEKHGVVSAFTAKKMAEQARKLTASDYAVSLTGVAGPDSLEGYPAGTVYIGLATTENVQSFKVNIAGRSRTDVR
KIAVLHAFNQLRKTLLKNENML

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=535554 I6J38_RS08995 WP_006269156.1 1790805..1792073(+) (cinA) [Streptococcus constellatus strain FDAARGOS_1208]
ATGAAAGCAGAAATTATTGCTGTAGGTACTGAAATTCTGACCGGGCAAATTGTCAATACGAATGCTCAATTTTTATCGGA
AAAATTAGCTAGTTTAGGGATTGATGTTTATTTCCAGACTGCTGTCGGTGACAATGAAAATCGTCTTTTATCTATTTTGG
AAATTGCAAAGAAACGGAGCGATCTTGTCATTCTTTGTGGTGGCTTGGGTCCAACAGAAGATGACTTGACCAAACAGGTG
TTGGCAAAATTTTTAAATCGCAGGTTGGTCTTTGACCAAGTAGCTATGGAAAAATTAGATCGTTTCTTCGCGAGTCGACT
GGACTATGTTCGAACACCAAATAATGAGCGGCAAGCTCAGATAGTGGAAGATTCGATTTCTCTACAAAACGAAACCGGAC
TTGCGGTAGGGGGTGTGATTGAAGTAAGTGGTGTAACTTATGTTGTTCTGCCCGGTCCACCTAGTGAATTAAAACCTATG
GTGAACAATGAGCTGATTCCGATTTTAGCAACGGATCAAAAATTGTATTCAAGAGTTTTGCGCTTCTTTGGCATTGGTGA
AAGTCAATTAGTAACTCTTTTAGGAGATTTAATTGATGCTCAGATCGATCCGACCATTGCTCCTTATGCTAAGACGGGAG
AGGTGACATTGCGATTGTCCACAAAGGCTAGCAGTCAAAAAGAAGCAGATACTAAGTTTGCTTATTTGGAAAAGAAAATT
TTAGCTGTACAGACTTTTGAGAAACAACGTTTAGTGGACCTTTTCTATGCTTATGGAGATGATAATTCTCTAGCGCAGAC
AACTTTTGAATTGTTGAGGAGAGCAGGCAAGACTGTTACAGCAGCCGAAAGTTTGACTGCAGGCCTTTTTCAAGCAACTT
TGGCAAACTTTTCTGGAGCCTCTAATGTCTTTAGTGGTGGCTTTGTCACTTACAGTATGGAGGAAAAGAGCCGCATGCTG
GACATTCCTTTGGCAGACTTGGAAAAACATGGAGTTGTTTCTGCTTTTACAGCAAAGAAAATGGCTGAGCAGGCCAGAAA
ATTGACTGCCAGTGACTATGCAGTGAGTTTGACGGGTGTGGCAGGTCCAGACAGCTTAGAAGGATATCCGGCAGGGACAG
TTTATATTGGCTTAGCAACCACAGAGAATGTACAATCTTTTAAGGTTAATATTGCCGGTCGTAGTCGGACTGATGTACGA
AAAATAGCTGTTCTGCATGCTTTCAATCAGTTACGAAAAACTTTATTAAAAAACGAAAATATGCTATAA

Domains

Predicted by InterproScan.

Competence-damaged protein (CinA)

(262-415)

Damage-inducible protein CinA KH domain (CinA_KH)

(177-240)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-170)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F9PAA4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Streptococcus mitis SK321

74.402

99.052

0.737
  cinA Streptococcus pneumoniae TIGR4

74.402

99.052

0.737
  cinA Streptococcus pneumoniae Rx1

74.402

99.052

0.737
  cinA Streptococcus pneumoniae R6

74.402

99.052

0.737
  cinA Streptococcus pneumoniae D39

74.163

99.052

0.735
  cinA Streptococcus mitis NCTC 12261

73.923

99.052

0.732
  cinA Streptococcus mutans UA159

71.395

100

0.716
  cinA Streptococcus suis isolate S10

55.288

98.578

0.545
  cinA Bacillus subtilis subsp. subtilis str. 168

44.976

99.052

0.445